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BD02T64_scaffold_141

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Displaying items 1-30 of 249 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_141_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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202..1386
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000364958C
Uncharacterized protein {ECO:0000313|EMBL:KGJ95236.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_141_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1534..2382)
DNA (849bp) protein (283aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=167879 species="B
tryptophan synthase subunit alpha n=1 Tax=Colwellia piezophila RepID=UPI00037945DE
BD02T64_scaffold_141_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2382..3629)
DNA (1248bp) protein (416aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; C
trpB2; tryptophan synthase subunit beta (EC:4.2.1.20)
tryptophan synthase subunit beta n=1 Tax=Colwellia piezophila RepID=UPI00037CF6E5
BD02T64_scaffold_141_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3631..5046)
DNA (1416bp) protein (472aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000313|EMBL:KGJ96118.1}; EC=4.1.1.48 {ECO:0000313|EMBL:KGJ96118.1};; EC=5.3.1.24 {ECO:0000313|EMBL:KGJ96118.1};; TaxID=28229 species="Bacteria; Proteo
trpC_F; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC:4.1.1.48 5.3.1.24)
Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YC1_COLP3
BD02T64_scaffold_141_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5049..6068)
DNA (1020bp) protein (340aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromon
anthranilate phosphoribosyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00037A48E5
BD02T64_scaffold_141_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6061..6723)
DNA (663bp) protein (221aa)
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:KGJ96116.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KGJ96116.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alter
trpG; glutamine amido-transferase (EC:4.1.3.27)
anthranilate synthase subunit II n=1 Tax=Colwellia piezophila RepID=UPI00035D7DF0
BD02T64_scaffold_141_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6723..8360)
DNA (1638bp) protein (546aa)
trpE; anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component 1 {ECO:0000256|PIRNR:PIRNR001373}; EC=4.1.3.27 {ECO:0000256|PIRNR:PIRNR001373};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; C
Anthranilate synthase component 1 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YC4_COLP3
BD02T64_scaffold_141_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8763..9668
DNA (906bp) protein (302aa)
PHP domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YC5_COLP3
PHP domain protein {ECO:0000313|EMBL:KGJ92946.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vi
phosphotransferase domain-containing protein
BD02T64_scaffold_141_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9705..10325
DNA (621bp) protein (207aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YC6_COLP3
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:KGJ92945.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psy
Sua5/YciO/YrdC/YwlC family protein
BD02T64_scaffold_141_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10435..11511
DNA (1077bp) protein (359aa)
rluB; ribosomal large subunit pseudouridine synthase B (EC:4.2.1.70)
Ribosomal large subunit pseudouridine synthase B n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YC7_COLP3
Pseudouridine synthase Rsu {ECO:0000313|EMBL:KGJ92944.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
BD02T64_scaffold_141_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11577..12743
DNA (1167bp) protein (389aa)
rnd; ribonuclease D (EC:3.1.26.3)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=167879 species="Bacteria; Proteobacteria; Gamm
Ribonuclease D n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YC8_COLP3
BD02T64_scaffold_141_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12733..13143)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Z53_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27364.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_141_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13277..13567
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000366B680
YcgL domain-containing protein GAB14E_0057 {ECO:0000256|HAMAP-Rule:MF_01866}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
hypothetical protein
BD02T64_scaffold_141_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13570..14613
DNA (1044bp) protein (348aa)
Putative transglycosylase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YD0_COLP3
Lytic murein transglycosylase {ECO:0000313|EMBL:KGJ92941.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source=
transglycosylase
BD02T64_scaffold_141_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14629..15147
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YD1_COLP3
UPF0260 protein ND2E_2406 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
hypothetical protein
BD02T64_scaffold_141_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15209..16081
DNA (873bp) protein (291aa)
Membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YD2_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ96107.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
membrane protein
BD02T64_scaffold_141_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16368..17906
DNA (1539bp) protein (513aa)
NAD(P) transhydrogenase subunit alpha {ECO:0000256|PIRNR:PIRNR000203}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000203};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484K1_COLP3
BD02T64_scaffold_141_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17917..19308
DNA (1392bp) protein (464aa)
pntB; pyridine nucleotide transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484K0_COLP3
BD02T64_scaffold_141_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19613..20863
DNA (1251bp) protein (417aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colw
icd; isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Colwellia psychrerythraea RepID=Q1XIQ8_COLPS
BD02T64_scaffold_141_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20936..21724)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N4_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27114.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_141_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22324..23715
DNA (1392bp) protein (464aa)
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwelli
Aspartokinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N2_COLP3
BD02T64_scaffold_141_22
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23784..24269)
DNA (486bp) protein (162aa)
Glutathione peroxidase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N0_COLP3
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viri
glutathione peroxidase
BD02T64_scaffold_141_23
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24429..25034
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003645CDA
Type III effector HopPmaJ {ECO:0000313|EMBL:EGH00242.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
hypothetical protein
BD02T64_scaffold_141_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25076..25957
DNA (882bp) protein (294aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:KGJ87619.1}; EC=1.1.1.60 {ECO:0000313|EMBL:KGJ87619.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colw
3-hydroxyisobutyrate dehydrogenase family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483M9_COLP3
3-hydroxyisobutyrate dehydrogenase
BD02T64_scaffold_141_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26098..27474)
DNA (1377bp) protein (459aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae
sbcB; exonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483M2_COLP3
BD02T64_scaffold_141_26
Pseudoalteromonas agarivorans, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27671..28975
DNA (1305bp) protein (435aa)
Site-specific recombinase, phage integrase family n=1 Tax=Pseudoalteromonas sp. Bsw20308 RepID=M5H2F3_9GAMM rbh
Phage integrase family site specific recombinase {ECO:0000313|EMBL:ENN99002.1}; TaxID=1307437 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalt
phage integrase family site specific recombinase
BD02T64_scaffold_141_27
unknown

Not on your lists

comp(28986..29207)
DNA (222bp) protein (74aa)

This feature has no annotations

BD02T64_scaffold_141_28
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29211..30119)
DNA (909bp) protein (303aa)
Uncharacterized protein n=3 Tax=Alteromonas macleodii RepID=K7RZM4_ALTMA rbh
hypothetical protein
Plasmid, complete sequence {ECO:0000313|EMBL:AGP99795.1}; TaxID=1300258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas ma
BD02T64_scaffold_141_29
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30771..31538
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=J9Y8I3_ALTMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ99887.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_141_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31854..32237)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=J9Y2R8_ALTMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ99884.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
Displaying items 1-30 of 249 in total

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