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BD02T64_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_160_1
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1775)
DNA (1773bp) protein (591aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonine--tRNA ligase; Threonyl-
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYT_COLP3
BD02T64_scaffold_160_2
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2025..4121
DNA (2097bp) protein (699aa)
Sensory box/GGDEF/EAL domain protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6ZCR5_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE42339.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
BD02T64_scaffold_160_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4118..5839)
DNA (1722bp) protein (574aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480A7_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ89583.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_160_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5952..6284
DNA (333bp) protein (111aa)
Ferredoxin, 4Fe-4S n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480A6_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ89480.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
ferredoxin, 4Fe-4S
BD02T64_scaffold_160_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6363..7271
DNA (909bp) protein (303aa)
Fructosamine kinase family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480A5_COLP3
fructosamine kinase
Fructosamine kinase family protein {ECO:0000313|EMBL:AAZ28591.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
BD02T64_scaffold_160_6
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7358..7576
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480A4_COLP3
Zn-ribbon protein {ECO:0000313|EMBL:KJE46185.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
hypothetical protein
BD02T64_scaffold_160_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7654..9015
DNA (1362bp) protein (454aa)
multidrug transporter MatE n=1 Tax=Colwellia piezophila RepID=UPI00035D3F50
MATE efflux family protein {ECO:0000313|EMBL:KGJ97231.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
norM; multidrug resistance protein NorM
BD02T64_scaffold_160_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9415..9894
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482M8_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ24895.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_160_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9891..10799
DNA (909bp) protein (303aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rR
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000361A237
SAM-dependent methyltransferase
BD02T64_scaffold_160_10
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10883..11659
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6ZEK3_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE37778.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_160_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11989..12432
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003703912
Uncharacterized protein {ECO:0000313|EMBL:KGJ87374.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_160_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12500..14389)
DNA (1890bp) protein (630aa)
Putative lipoprotein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Z72_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ86696.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
lipoprotein
BD02T64_scaffold_160_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14622..16925
DNA (2304bp) protein (768aa)
UPF0313 protein CPS_3203 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Z71_COLP3
UPF0313 protein ND2E_0867 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
radical SAM domain-containing protein
BD02T64_scaffold_160_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16980..19028)
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000381F662
Histidine kinase {ECO:0000313|EMBL:KGJ87371.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibr
Signal transduction histidine kinase-like protein
BD02T64_scaffold_160_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19035..19655)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000366080C rbh
CheC, phosphatase, inhibitor of MCP methylation {ECO:0000313|EMBL:KGJ87370.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="
MCP methylation inhibitor CheC
BD02T64_scaffold_160_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19667..20002)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037B08FF
Response regulator receiver protein {ECO:0000313|EMBL:KGJ87369.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
response regulator receiver
BD02T64_scaffold_160_17
unknown

Not on your lists

comp(20134..20460)
DNA (327bp) protein (109aa)

This feature has no annotations

BD02T64_scaffold_160_18
unknown

Not on your lists

comp(20752..21072)
DNA (321bp) protein (107aa)

This feature has no annotations

BD02T64_scaffold_160_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21650..23197
DNA (1548bp) protein (516aa)
ABC transporter, ATP-binding protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Z70_COLP3
ABC transporter related protein {ECO:0000313|EMBL:KGJ86694.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
ABC transporter ATP-binding protein
BD02T64_scaffold_160_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23320..24159
DNA (840bp) protein (280aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Z69_COLP3
hypothetical protein
BD02T64_scaffold_160_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24200..24598)
DNA (399bp) protein (133aa)
Putative Glutathione-dependent formaldehyde-activating enzyme n=10 Tax=Vibrio nigripulchritudo RepID=U4KC99_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KGJ88700.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
putative Glutathione-dependent formaldehyde-activating enzyme
BD02T64_scaffold_160_22
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24630..25397)
DNA (768bp) protein (256aa)
Extracellular solute-binding protein family 3 n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RHL5_9DELT
Extracellular solute-binding protein family 3
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CCO25071.1}; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibri
BD02T64_scaffold_160_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25384..26733)
DNA (1350bp) protein (450aa)
RNA helicase n=1 Tax=Colwellia piezophila RepID=UPI00035D00CC
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:KGJ87364.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
ATP-dependent RNA helicase SrmB
BD02T64_scaffold_160_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26769..28181)
DNA (1413bp) protein (471aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=28229 species="Bacteria; Pro
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
glutaminyl-tRNA synthetase n=1 Tax=Colwellia piezophila RepID=UPI00036FC343
BD02T64_scaffold_160_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29758..31080)
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482N6_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ87735.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
BD02T64_scaffold_160_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31059..31838)
DNA (780bp) protein (260aa)
dnaQ; DNA polymerase III, epsilon subunit (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:AAZ27480.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AAZ27480.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colw
DNA polymerase III, epsilon subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482N7_COLP3
BD02T64_scaffold_160_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31881..32366)
DNA (486bp) protein (162aa)
Putative membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482N8_COLP3
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AAZ24345.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
BD02T64_scaffold_160_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32378..33124)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482N9_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ87738.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_160_29
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33324..35732
DNA (2409bp) protein (803aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CBQ5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR27792.1}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa
hypothetical protein
BD02T64_scaffold_160_30
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35909..38200
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=Glaciecola psychrophila 170 RepID=K6Z644_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE40636.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
Displaying items 1-30 of 98 in total

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