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BD02T64_scaffold_286

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Displaying items 1-30 of 109 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_286_1
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2787
DNA (2787bp) protein (929aa)
Uncharacterized protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZB92_SHEVD
Uncharacterized protein {ECO:0000313|EMBL:BAJ03287.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (
thermolysin metallopeptidase family
BD02T64_scaffold_286_2
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2819..3094)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037C4AE8
Uncharacterized protein {ECO:0000313|EMBL:KJE42866.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
BD02T64_scaffold_286_3
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3139..3639)
DNA (501bp) protein (167aa)
Nickel-containing superoxide dismutase, putative n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZLZ1_SHEVD
nickel-containing superoxide dismutase
Nickel-containing superoxide dismutase, putative {ECO:0000313|EMBL:BAJ02690.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" sour
BD02T64_scaffold_286_4
unknown

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comp(3653..3856)
DNA (204bp) protein (68aa)

This feature has no annotations

BD02T64_scaffold_286_5
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3885..4313)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489R4_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KJE42863.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
BD02T64_scaffold_286_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4338..4778)
DNA (441bp) protein (147aa)
Pseudoazurin n=1 Tax=Moritella sp. PE36 RepID=A6FGG7_9GAMM
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:KGJ87756.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" s
pseudoazurin
BD02T64_scaffold_286_7
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4998..6986)
DNA (1989bp) protein (663aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae;
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6Y935_9ALTE rbh
multi-sensor signal transduction histidine kinase
BD02T64_scaffold_286_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7238..8413)
DNA (1176bp) protein (392aa)
argE1; acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; Tax
Acetylornithine deacetylase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489P7_COLP3
BD02T64_scaffold_286_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8676..9716
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489P6_COLP3
BD02T64_scaffold_286_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9727..10503
DNA (777bp) protein (259aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:00
Acetylglutamate kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=ARGB_COLP3
BD02T64_scaffold_286_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10524..11450
DNA (927bp) protein (309aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwe
Ornithine carbamoyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489P4_COLP3
BD02T64_scaffold_286_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11525..12763
DNA (1239bp) protein (413aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=ASSY_COLP3
BD02T64_scaffold_286_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12861..14798
DNA (1938bp) protein (646aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_0000
argHA; bifunctional argininosuccinate lyase/N-acetylglutamate synthase (EC:2.3.1.1 4.3.2.1)
bifunctional argininosuccinate lyase/N-acetylglutamate synthase n=1 Tax=Colwellia piezophila RepID=UPI00036A9333
BD02T64_scaffold_286_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14839..16149
DNA (1311bp) protein (437aa)
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=1535422 species="Bact
argA; N-acetylglutamate synthase (EC:2.3.1.1)
N-acetylglutamate synthase n=1 Tax=Colwellia piezophila RepID=UPI0003608C35
BD02T64_scaffold_286_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16183..16869)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) RepID=A8H342_SHEPA
Uncharacterized protein {ECO:0000313|EMBL:KGJ98069.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_286_16
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16974..17552)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HBI5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ45738.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_286_17
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17545..18144)
DNA (600bp) protein (200aa)
GCN5-related N-acetyltransferase n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KPV8_SHEWM
Acetyltransferase {ECO:0000313|EMBL:KJE40155.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.
N-acetyltransferase GCN5
BD02T64_scaffold_286_18
unknown

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18246..18356
DNA (111bp) protein (37aa)

This feature has no annotations

BD02T64_scaffold_286_19
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18389..19678
DNA (1290bp) protein (430aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KPV9_SHEWM
transcriptional regulator
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ACA87642.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae;
BD02T64_scaffold_286_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19680..22250)
DNA (2571bp) protein (857aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:KGJ89732.1}; EC=2.4.1.129 {ECO:0000313|EMBL:KGJ89732.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; C
penicillin-binding protein 1a n=1 Tax=Colwellia piezophila RepID=UPI00037C14D5
penicillin-binding protein
BD02T64_scaffold_286_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22379..23458
DNA (1080bp) protein (360aa)
Type IV pilus biogenesis protein PilM n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489N9_COLP3
pilM; type IV pilus biogenesis protein PilM
Type IV pilus biogenesis protein PilM {ECO:0000313|EMBL:AAZ28245.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_286_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23446..24027
DNA (582bp) protein (194aa)
Type IV pilus biogenesis protein PilN n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489N8_COLP3
Fimbrial assembly family protein {ECO:0000313|EMBL:KGJ89730.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
pilN; type IV pilus biogenesis protein PilN
BD02T64_scaffold_286_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24024..24626
DNA (603bp) protein (201aa)
Type IV pilus biogenesis protein PilO n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489N7_COLP3
pilO; type IV pilus biogenesis protein PilO
Type IV pilus biogenesis protein PilO {ECO:0000313|EMBL:AAZ26877.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_286_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24623..25147
DNA (525bp) protein (175aa)
Type IV pilus biogenesis protein PilP n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489N6_COLP3
pilP; type IV pilus biogenesis protein PilP
Type IV pilus biogenesis protein PilP {ECO:0000313|EMBL:AAZ27270.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_286_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25174..27279
DNA (2106bp) protein (702aa)
Type IV pilus biogenesis protein PilQ n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489N5_COLP3
Type IV pilus secretin PilQ {ECO:0000313|EMBL:KGJ88487.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
type IV pilus biogenesis protein PilQ
BD02T64_scaffold_286_26
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27481..27999
DNA (519bp) protein (173aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammap
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=AROK_COLP3
BD02T64_scaffold_286_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28077..29141
DNA (1065bp) protein (355aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=28229 species="Bacteria;
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=AROB_COLP3
BD02T64_scaffold_286_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29203..30594
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489N2_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ28198.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_286_29
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30718..31536
DNA (819bp) protein (273aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteri
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000379AA64
DNA adenine methylase
BD02T64_scaffold_286_30
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31682..32401)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AP8_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ92537.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
Displaying items 1-30 of 109 in total

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