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BD02T64_scaffold_315

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_315_1
unknown

Not on your lists

comp(134..676)
DNA (543bp) protein (181aa)

This feature has no annotations

BD02T64_scaffold_315_2
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(826..1029)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HB32_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ESP94691.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
BD02T64_scaffold_315_3
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1164..1430)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Shewanella baltica RepID=A6WLZ0_SHEB8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK46959.1}; TaxID=407976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (s
BD02T64_scaffold_315_4
unknown

Not on your lists

comp(1927..2556)
DNA (630bp) protein (210aa)

This feature has no annotations

BD02T64_scaffold_315_5
Pseudoalteromonas atlantica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2710..3123)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) RepID=Q15W31_PSEA6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG39907.1}; TaxID=342610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudo
BD02T64_scaffold_315_6
Psychromonas ingrahamii, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4012..4977
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI000367C479
integron integrase
Integron integrase {ECO:0000313|EMBL:ABM03211.1}; TaxID=357804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychromonas ingraham
BD02T64_scaffold_315_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5183..5449
DNA (267bp) protein (89aa)
Acetyltransferase, GNAT family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482V5_COLP3
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KGJ89975.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
acetyltransferase
BD02T64_scaffold_315_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5466..6848)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036782AC
Peptidase M28 {ECO:0000313|EMBL:KGJ89976.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
M23B family peptidase
BD02T64_scaffold_315_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6895..7437)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482V3_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ26603.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_315_10
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7616..8737
DNA (1122bp) protein (374aa)
Aminotransferase, class V n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482V2_COLP3
Alanine--glyoxylate aminotransferase {ECO:0000313|EMBL:KJE43708.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalas
aminotransferase class V
BD02T64_scaffold_315_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8752..9210)
DNA (459bp) protein (153aa)
gloA; lactoylglutathione lyase (EC:4.4.1.5)
glyoxalase n=1 Tax=Colwellia piezophila RepID=UPI0003674901
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KGJ89979.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" sour
BD02T64_scaffold_315_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9462..11288
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000371B3B6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ89706.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein rbh
BD02T64_scaffold_315_13
unknown

Not on your lists

comp(11382..11777)
DNA (396bp) protein (132aa)

This feature has no annotations

BD02T64_scaffold_315_14
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11794..12585)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Glaciecola psychrophila 170 RepID=M4S244_9ALTE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH44772.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
BD02T64_scaffold_315_15
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12609..13352)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Glaciecola psychrophila 170 RepID=K6Z1P9_9ALTE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH42934.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
BD02T64_scaffold_315_16
Ferrimonas balearica, Ferrimonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13763..13969)
DNA (207bp) protein (69aa)
Transcriptional regulator n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SKY8_FERBD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADN74382.1}; TaxID=550540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferrimonas.;" source="Ferrimonas baleari
BD02T64_scaffold_315_17
Shewanella frigidimarina, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13969..14541)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q07WB8_SHEFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI73696.1}; Flags: Precursor;; TaxID=318167 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
BD02T64_scaffold_315_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14792..15451)
DNA (660bp) protein (220aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482U9_COLP3
BD02T64_scaffold_315_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15525..16316)
DNA (792bp) protein (264aa)
electron transporter RsxE n=1 Tax=Colwellia piezophila RepID=UPI0003807497
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwell
electron transport complex RsxE subunit
BD02T64_scaffold_315_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16309..17037)
DNA (729bp) protein (243aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482U7_COLP3
RnfABCDGE type electron transport complex subunit G
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwel
BD02T64_scaffold_315_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17034..18167)
DNA (1134bp) protein (378aa)
electron transporter RnfG n=1 Tax=Colwellia piezophila RepID=UPI000366744B
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwell
RnfABCDGE type electron transport complex subunit D
BD02T64_scaffold_315_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18176..20404)
DNA (2229bp) protein (743aa)
Electron transport complex protein RnfC n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482U5_COLP3
electron transport complex protein RnfC
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwel
BD02T64_scaffold_315_23
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20413..20967)
DNA (555bp) protein (185aa)
Electron transport complex protein RnfB n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482U4_COLP3
electron transport complex protein RnfB
Electron transport complex subunit B {ECO:0000256|HAMAP-Rule:MF_00463}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Th
BD02T64_scaffold_315_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20978..21559)
DNA (582bp) protein (194aa)
Electron transport complex protein RnfA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RNFA_COLP3
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwell
RnfABCDGE type electron transport complex subunit A
BD02T64_scaffold_315_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21725..23635)
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000381F90F
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:KGJ87787.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
GGDEF/EAL domain-containing protein
BD02T64_scaffold_315_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24147..24602
DNA (456bp) protein (152aa)
Ribosome maturation factor RimP n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RIMP_COLP3
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
BD02T64_scaffold_315_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24782..26278
DNA (1497bp) protein (499aa)
Transcription termination factor NusA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482U0_COLP3
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.
nusA; transcription termination factor NusA
BD02T64_scaffold_315_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26302..28983
DNA (2682bp) protein (894aa)
translation initiation factor IF-2 n=1 Tax=Colwellia piezophila RepID=UPI0003738C23
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
infB; translation initiation factor IF-2
BD02T64_scaffold_315_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29189..29581
DNA (393bp) protein (131aa)
ribosome-binding factor A n=1 Tax=Colwellia piezophila RepID=UPI000371E9D1
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
rbfA; ribosome-binding factor A
BD02T64_scaffold_315_30
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29584..30531
DNA (948bp) protein (316aa)
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthas
tRNA pseudouridine synthase B n=1 Tax=Colwellia piezophila RepID=UPI0003700098
truB; tRNA pseudouridine synthase B
Displaying items 1-30 of 94 in total

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