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BD02T64_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_324_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..221
DNA (219bp) protein (73aa)
Cold-shock DNA-binding domain family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488M7_COLP3 rbh
cold shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain family protein {ECO:0000313|EMBL:AAZ24692.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Co
BD02T64_scaffold_324_2
Pseudoalteromonas sp. BSi20311, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330..1046)
DNA (717bp) protein (239aa)
Na+-transporting NADH:ubiquinone oxidoreductase subunit F {ECO:0000313|EMBL:GAA64977.1}; EC=1.6.5.- {ECO:0000313|EMBL:GAA64977.1};; TaxID=383911 species="Bacteria; Proteobacteria; Gammaproteobacteria;
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000367B223
hypothetical protein
BD02T64_scaffold_324_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1043..1804)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003729DFA
Uncharacterized protein {ECO:0000313|EMBL:KGJ94921.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_324_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1804..4962)
DNA (3159bp) protein (1053aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YMX1_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KGK00138.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
Putative silver efflux pump
BD02T64_scaffold_324_5
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4964..6514)
DNA (1551bp) protein (517aa)
Cu(I)/Ag(I) efflux system membrane protein CusB n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YS66_9ALTE
Cu(I)/Ag(I) efflux system membrane protein CusB {ECO:0000313|EMBL:GAC19533.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;"
cusB; cation efflux system protein CusB
BD02T64_scaffold_324_6
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6504..7850)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XFW2_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC19534.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
cation efflux protein
BD02T64_scaffold_324_7
unknown

Not on your lists

comp(7992..8351)
DNA (360bp) protein (120aa)

This feature has no annotations

BD02T64_scaffold_324_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8470..9579)
DNA (1110bp) protein (370aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Colwellia piezophila RepID=UPI000361F17E
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:KGJ94925.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Co
ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase
BD02T64_scaffold_324_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9643..10308)
DNA (666bp) protein (222aa)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:KGJ94926.1}; EC=2.5.1.9 {ECO:0000313|EMBL:KGJ94926.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwel
ribE1; riboflavin synthase subunit alpha (EC:2.5.1.9)
riboflavin synthase subunit alpha n=1 Tax=Colwellia piezophila RepID=UPI0003783B49
BD02T64_scaffold_324_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10329..11522)
DNA (1194bp) protein (398aa)
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:KGJ94927.1}; EC=1.1.1.193 {ECO:0000313|EMBL:KGJ94927.1};; EC=3.5.4.26 {ECO:0000313|EMBL:KGJ94927.1};; TaxID=28229 species="Bacteria; Proteobacter
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
diaminohydroxyphosphoribosylaminopyrimidine deaminase n=1 Tax=Colwellia piezophila RepID=UPI000365D591
BD02T64_scaffold_324_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11537..12034)
DNA (498bp) protein (166aa)
Transcriptional repressor NrdR n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=NRDR_COLP3
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
BD02T64_scaffold_324_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12183..13439)
DNA (1257bp) protein (419aa)
glyA1; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase 1 {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT 1 {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase 1 {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:00002
serine hydroxymethyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00037B323E rbh
BD02T64_scaffold_324_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13743..14369)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488N8_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ25771.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_324_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14366..14956)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036C56DB
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AAZ27494.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Co
BD02T64_scaffold_324_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14999..16162)
DNA (1164bp) protein (388aa)
Protein NatB n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488P0_COLP3
natB; protein NatB
Protein NatB {ECO:0000313|EMBL:AAZ25475.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (strain
BD02T64_scaffold_324_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16159..16905)
DNA (747bp) protein (249aa)
ATP-binding transport protein NatA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488P1_COLP3
natA; ATP-binding transport protein NatA
ATP-binding transport protein NatA {ECO:0000313|EMBL:AAZ28673.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
BD02T64_scaffold_324_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16926..18368)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036A31E5
alpha/beta hydrolase
Hydrolase, alpha/beta hydrolase fold family {ECO:0000313|EMBL:AAZ27593.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Col
BD02T64_scaffold_324_18
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18706..18924
DNA (219bp) protein (73aa)
EF hand domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488P3_COLP3
EF hand domain-containing protein {ECO:0000313|EMBL:KJE40227.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassom
EF hand domain-containing protein
BD02T64_scaffold_324_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19080..19745
DNA (666bp) protein (222aa)
hemolysin n=1 Tax=Colwellia piezophila RepID=UPI000375A7B9
Channel protein, hemolysin III family {ECO:0000313|EMBL:KGJ88941.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
hemolysin III
BD02T64_scaffold_324_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19992..20312)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WM8_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27682.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_324_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20409..21938)
DNA (1530bp) protein (510aa)
Sulfate permease family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WM7_COLP3
sulfate permease
Sulfate permease family protein {ECO:0000313|EMBL:AAZ24192.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
BD02T64_scaffold_324_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22154..23740)
DNA (1587bp) protein (529aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colw
Sensor histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMD0_NEPCE
periplasmic sensor signal transduction histidine kinase
BD02T64_scaffold_324_23
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24085..25593)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FS94_SHESH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABV35717.1}; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
BD02T64_scaffold_324_24
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25649..26872)
DNA (1224bp) protein (408aa)
Cytochrome-c peroxidase {ECO:0000313|EMBL:ABV35718.1}; EC=1.11.1.5 {ECO:0000313|EMBL:ABV35718.1};; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadal
Cytochrome-c peroxidase n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FS95_SHESH
cytochrome-c peroxidase
BD02T64_scaffold_324_25
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26872..27519)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FS96_SHESH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV35719.1}; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
BD02T64_scaffold_324_26
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27690..28730)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FS97_SHESH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV35720.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis
BD02T64_scaffold_324_27
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28880..31489)
DNA (2610bp) protein (870aa)
Outer membrane receptor protein mostly Fe transport-like protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FS98_SHESH rbh
Iron transporter {ECO:0000313|EMBL:KJE44975.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
Outer membrane receptor protein mostly Fe transport-like protein rbh
BD02T64_scaffold_324_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31893..32234
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WM3_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ25146.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_324_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32248..32985)
DNA (738bp) protein (246aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=TRMB_COLP3
BD02T64_scaffold_324_30
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33076..33414)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000360E591
Uncharacterized protein {ECO:0000313|EMBL:KGJ95566.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
Displaying items 1-30 of 65 in total

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