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BD02T64_scaffold_660

Search features with annotation key words

Displaying items 1-30 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_660_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..106)
DNA (105bp) protein (35aa)
50S ribosomal protein L14 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RL14_COLP3
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwelli
BD02T64_scaffold_660_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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706..1152
DNA (447bp) protein (149aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W66_COLP3
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" sou
dksA; DnaK suppressor protein
BD02T64_scaffold_660_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1157..2119
DNA (963bp) protein (321aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
glutamyl-Q tRNA(Asp) ligase n=1 Tax=Colwellia piezophila RepID=UPI0003796936
tRNA synthetase class I family protein
BD02T64_scaffold_660_4
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2150..2611
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CB40_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR28598.1}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa
hypothetical protein
BD02T64_scaffold_660_5
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2624..3250
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Vibrio marinus RepID=UPI0002EA5C86
Flavoprotein oxygenase domain-containing protein {ECO:0000313|EMBL:ERG45758.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalt
protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family protein
BD02T64_scaffold_660_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3279..3959
DNA (681bp) protein (227aa)
short-chain dehydrogenase n=1 Tax=Colwellia piezophila RepID=UPI000376A9CF
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGJ90696.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
short chain dehydrogenase/reductase family oxidoreductase
BD02T64_scaffold_660_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4460..5500
DNA (1041bp) protein (347aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=28229 species="Bacteria; Proteobacteria; G
pcnB; poly(A) polymerase (EC:2.7.7.19)
Poly(A) polymerase I n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W62_COLP3
BD02T64_scaffold_660_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5509..6003
DNA (495bp) protein (165aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KGJ95421.1}; EC=2.7.6.3 {ECO:0000313|EMBL:KGJ95421.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteo
folK2; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W61_COLP3
BD02T64_scaffold_660_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6106..6900
DNA (795bp) protein (265aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00036CC0EB
BD02T64_scaffold_660_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7004..7858
DNA (855bp) protein (285aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=PANC_COLP3
BD02T64_scaffold_660_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7863..9503)
DNA (1641bp) protein (547aa)
glutamate decarboxylase n=1 Tax=Colwellia piezophila RepID=UPI000372B175
decarboxylase
Putative decarboxylase {ECO:0000313|EMBL:AAZ25150.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
BD02T64_scaffold_660_12
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9948..10487
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Pseudoalteromonas ruthenica RepID=UPI0003468E74 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE41630.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_660_13
Pseudoalteromonas spongiae, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10501..11763
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M2Q1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG52718.1}; TaxID=1117319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
hypothetical protein
BD02T64_scaffold_660_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11772..12488)
DNA (717bp) protein (239aa)
SAM-dependent methlyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00036DC39A
Methyltransferase {ECO:0000313|EMBL:KGJ87074.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vib
hypothetical protein
BD02T64_scaffold_660_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12504..13268)
DNA (765bp) protein (255aa)
membrane protein n=1 Tax=Colwellia piezophila RepID=UPI0003725112
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
ABC transporter permease
BD02T64_scaffold_660_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13273..14217)
DNA (945bp) protein (315aa)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:KGJ87072.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KGJ87072.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelli
ABC transporter n=1 Tax=Colwellia piezophila RepID=UPI00037C6E0D
ABC transporter ATP-binding protein
BD02T64_scaffold_660_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14431..15303
DNA (873bp) protein (291aa)
Acyltransferase family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q487L9_COLP3
acyltransferase
Acyltransferase family protein {ECO:0000313|EMBL:AAZ28732.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
BD02T64_scaffold_660_18
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15383..15877
DNA (495bp) protein (165aa)
Transcriptional regulator n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HSR0_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:KJE40908.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas act
transcriptional regulator
BD02T64_scaffold_660_19
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15886..17850)
DNA (1965bp) protein (655aa)
Choline/carnitine/betaine transporter n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1L5C5_9GAMM rbh
Choline transporter {ECO:0000313|EMBL:KJE48263.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.
choline transporter
BD02T64_scaffold_660_20
Paraglaciecola mesophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18070..20724
DNA (2655bp) protein (885aa)
TonB-dependent receptor n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6Z0M9_9ALTE rbh
TonB-dependent receptor {ECO:0000313|EMBL:GAC22553.1}; TaxID=1128912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
TonB-dependent receptor
BD02T64_scaffold_660_21
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20844..22832
DNA (1989bp) protein (663aa)
TPR domain protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YGX1_9ALTE rbh
TPR domain protein {ECO:0000313|EMBL:GAC17402.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola arcti
sulfotransferase
BD02T64_scaffold_660_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22839..25658)
DNA (2820bp) protein (940aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037B0DCA
Alpha-1,6-glucosidase, pullulanase-type {ECO:0000313|EMBL:KGJ90405.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
alpha amylase
BD02T64_scaffold_660_23
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25846..26577
DNA (732bp) protein (244aa)
3-oxoacyl-ACP reductase n=1 Tax=Alteromonas macleodii (strain Balearic Sea AD45) RepID=K0E8D3_ALTMB rbh
3-oxoacyl-ACP reductase rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AFT94642.1}; TaxID=1004787 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macle
BD02T64_scaffold_660_24
unknown

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comp(26672..27484)
DNA (813bp) protein (271aa)

This feature has no annotations

BD02T64_scaffold_660_25
Vibrio neptunius, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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27815..28603
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Vibrio genomosp. F10 RepID=UPI0002FA8B4A
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJY85747.1}; TaxID=170651 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio neptun
amino acid ABC transporter periplasmic protein
BD02T64_scaffold_660_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28785..29720)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037E055B rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ89506.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_660_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30276..30677
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ91909.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
BD02T64_scaffold_660_28
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31137..31811)
DNA (675bp) protein (225aa)
Putative esterase n=1 Tax=Alteromonas sp. (strain SN2) RepID=F5ZDK2_ALTSS rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ98092.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
putative esterase
BD02T64_scaffold_660_29
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31894..32529)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036AC4DC rbh
Esterase {ECO:0000313|EMBL:KJE42072.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
putative esterase
BD02T64_scaffold_660_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32558..33985)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003647DA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ90507.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
peptidase M23B
Displaying items 1-30 of 150 in total

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