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BD02T64_scaffold_1443

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1443_1
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..3368)
DNA (3366bp) protein (1122aa)
Outer membrane adhesin like proteiin n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2Z9_PIRSD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE47371.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hemagglutinin/hemolysin-like protein
BD02T64_scaffold_1443_2
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3402..4613)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6XMV9_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC13016.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
hypothetical protein
BD02T64_scaffold_1443_3
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4626..5927)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YNT7_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE39711.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
exported protein of unknown function [TPR repeat]
BD02T64_scaffold_1443_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6020..6862)
DNA (843bp) protein (281aa)
Putative bax protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZU4_COLP3
bax protein
Putative bax protein {ECO:0000313|EMBL:AAZ28645.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
BD02T64_scaffold_1443_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6921..7754)
DNA (834bp) protein (278aa)
Putative membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZU3_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ97939.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1443_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7852..8550)
DNA (699bp) protein (233aa)
Transporter, LysE family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZU2_COLP3
amino acid transporter LysE
Transporter, LysE family {ECO:0000313|EMBL:AAZ25123.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
BD02T64_scaffold_1443_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8567..9130)
DNA (564bp) protein (188aa)
lipoprotein signal peptidase n=1 Tax=Colwellia piezophila RepID=UPI0003794D75
Uncharacterized protein {ECO:0000313|EMBL:KGJ89602.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1443_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9140..10927)
DNA (1788bp) protein (596aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:KGJ97935.1}; EC=3.6.3.44 {ECO:0000313|EMBL:KGJ97935.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwellia
ABC transporter n=1 Tax=Colwellia piezophila RepID=UPI00036B045F
ABC transporter ATP-binding/permease
BD02T64_scaffold_1443_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11070..11363)
DNA (294bp) protein (98aa)
Integration host factor subunit alpha n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=IHFA_COLP3
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=28229 species="Bacteria; Proteobacteri
ihfA; integration host factor subunit alpha
BD02T64_scaffold_1443_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11367..13775)
DNA (2409bp) protein (803aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYFB_COLP3
BD02T64_scaffold_1443_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13788..14783)
DNA (996bp) protein (332aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
phenylalanyl-tRNA synthetase n=1 Tax=Colwellia piezophila RepID=UPI00035FD5C5
BD02T64_scaffold_1443_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15324..17024)
DNA (1701bp) protein (567aa)
D-lactate dehydrogenase {ECO:0000256|PIRNR:PIRNR000101}; EC=1.1.1.28 {ECO:0000256|PIRNR:PIRNR000101};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliacea
D-lactate dehydrogenase (EC:1.1.1.28)
FAD/FMN-containing dehydrogenase n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HR28_9GAMM rbh
BD02T64_scaffold_1443_13
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17341..19776)
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Glaciecola psychrophila 170 RepID=K6ZQZ4_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH46430.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
BD02T64_scaffold_1443_14
unknown

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comp(20096..20323)
DNA (228bp) protein (76aa)

This feature has no annotations

BD02T64_scaffold_1443_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20474..21556
DNA (1083bp) protein (361aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=167879 species="Bacteria; Proteob
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036701BD
BD02T64_scaffold_1443_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21561..22232)
DNA (672bp) protein (224aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480D1_COLP3
radical SAM domain-containing protein
BD02T64_scaffold_1443_17
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22322..22981
DNA (660bp) protein (220aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase 1 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=QUEC1_COLP3
exoenzyme S synthesis protein B
BD02T64_scaffold_1443_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23329..23541
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480C8_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ28244.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1443_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23573..25600)
DNA (2028bp) protein (676aa)
excinuclease ABC subunit B n=1 Tax=Colwellia piezophila RepID=UPI00036BFBF3
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; excinuclease ABC subunit B
BD02T64_scaffold_1443_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25597..27150)
DNA (1554bp) protein (518aa)
multidrug transporter MatE n=1 Tax=Colwellia piezophila RepID=UPI00036924F7
MATE efflux family protein {ECO:0000313|EMBL:KGJ92899.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
MATE efflux family protein
Displaying 20 items

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