ggKbase home page

BD02T64_scaffold_1002_5

Organism: BD02T64_Colwellia_psychrerythraea_38_180_partial

partial RP 29 / 55 MC: 4 BSCG 30 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3586..4221)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A13_COLP3 similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 210.0
  • Bit_score: 362
  • Evalue 2.70e-97
DNA-binding transcriptional repressor FabR similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 210.0
  • Bit_score: 362
  • Evalue 7.60e-98
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AAZ26238.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 210.0
  • Bit_score: 362
  • Evalue 3.80e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Colwellia psychrerythraea → Colwellia → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGAGTGGAGTTCGTGCTCAGCAAAAAGAAAAAACCCGTCGGCTACTTGTTGAGGCGGCGCTAAATCAGTTAAGTGCTGAAAGAAGTTTCTCCAGCTTAAGTTTGCGGGAAGTTGCTAAAGAAGCAGGTCTGGCACCTACTTCCTTTTATCGTCATTTCACTGATATGAATGAACTTGGTCTTACTTTAGTAGATGAGGCTGGCTTGACCTTAAGGCAACTAATGCGTCAAGCACGTCAGCGTATAGCTAAAGGTGGTTCAGTTATACAAATTTCGGTTGAAACTTTTATGGAGCTGATAGAAAGCAACGGTAATGTTTTTCGTTTGCTGCTCCGAGAACGTTCAGGCACTTCATCGGCTTTTAGAGCAGCAGTTATTAGAGAAATCCGTTATTTTACTATGGAATTATGTGACTACTTACAACAAGCAAACGATTTAGACTCTGAAGTTGCCTATATGCAAGCCAATGCTGCCGTTACTATTGTTTTTAGTGCTGGCTCAGATGCACTGGATATGGAAGATAGTGCTGAAAGGCAACAGTTGTCAAAACAAACTATTCAACAATTGCGTTTTATTGCCCGTGGCGCGGCTGAACTCAGCGACAGACGAAAATTATCAAGGAGATCACGTAAGTGA
PROTEIN sequence
Length: 212
MSGVRAQQKEKTRRLLVEAALNQLSAERSFSSLSLREVAKEAGLAPTSFYRHFTDMNELGLTLVDEAGLTLRQLMRQARQRIAKGGSVIQISVETFMELIESNGNVFRLLLRERSGTSSAFRAAVIREIRYFTMELCDYLQQANDLDSEVAYMQANAAVTIVFSAGSDALDMEDSAERQQLSKQTIQQLRFIARGAAELSDRRKLSRRSRK*