ggKbase home page

BD02T64_scaffold_535

Search features with annotation key words

Displaying items 1-30 of 49 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_535_1
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..5043
DNA (5043bp) protein (1681aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HVM5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49333.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_535_2
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5114..5614)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GLG9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49332.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
BD02T64_scaffold_535_3
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5772..6635)
DNA (864bp) protein (288aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GKB6_9GAMM rbh
Phenazine biosynthesis protein PhzF family protein {ECO:0000313|EMBL:EPJ49331.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillace
phenazine biosynthesis-like protein
BD02T64_scaffold_535_4
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6693..7946)
DNA (1254bp) protein (418aa)
Valine-pyruvate aminotransferase n=1 Tax=Osedax symbiont Rs2 RepID=S6GQF2_9GAMM rbh
Valine-pyruvate aminotransferase {ECO:0000313|EMBL:EPJ49330.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osed
valine--pyruvate transaminase
BD02T64_scaffold_535_5
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8183..9580)
DNA (1398bp) protein (466aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
Coproporphyrinogen-III oxidase n=1 Tax=Osedax symbiont Rs2 RepID=S6HKC8_9GAMM rbh
coproporphyrinogen III oxidase
BD02T64_scaffold_535_6
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9751..10419)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GLG5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49327.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
BD02T64_scaffold_535_7
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10584..10943
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GKB2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49326.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_535_8
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11032..12354
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GLI9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49367.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_535_9
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12400..12708
DNA (309bp) protein (103aa)
BolA family protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GLD0_9GAMM rbh
BolA family protein {ECO:0000313|EMBL:EPJ50053.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont R
bolA protein
BD02T64_scaffold_535_10
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12833..13429)
DNA (597bp) protein (199aa)
Thiamine ABC transporter ATPase n=1 Tax=Osedax symbiont Rs2 RepID=S6GMI6_9GAMM rbh
Thiamine ABC transporter ATPase {ECO:0000313|EMBL:EPJ50054.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Oseda
thiQ; thiamine ABC transporter ATPase
BD02T64_scaffold_535_11
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13422..14984)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HXC4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ50055.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
thiP; thiamine transporter membrane protein
BD02T64_scaffold_535_12
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15062..16054)
DNA (993bp) protein (331aa)
Thiamine transporter substrate binding subunit n=1 Tax=Osedax symbiont Rs2 RepID=S6HLZ8_9GAMM rbh
Thiamine transporter substrate binding subunit {ECO:0000313|EMBL:EPJ50056.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;
tbpA; thiamine transporter substrate binding subunit
BD02T64_scaffold_535_13
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16439..17350
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GLD3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ50058.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
LPS biosynthesis choline kinase
BD02T64_scaffold_535_14
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17474..18100
DNA (627bp) protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Osedax symbiont Rs2 RepID=S6GMJ0_9GAMM rbh
ruvA; Holliday junction DNA helicase RuvA
BD02T64_scaffold_535_15
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18231..19250
DNA (1020bp) protein (340aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteri
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Osedax symbiont Rs2 RepID=S6HXC9_9GAMM rbh
holliday junction resolvasome, helicase subunit
BD02T64_scaffold_535_16
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19412..19819
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HM03_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ50061.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
4-hydroxybenzoyl-CoA thioesterase family active site
BD02T64_scaffold_535_17
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19859..20539
DNA (681bp) protein (227aa)
TolQ protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GRF6_9GAMM rbh
TolQ protein {ECO:0000313|EMBL:EPJ50062.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
biopolymer transport protein
BD02T64_scaffold_535_18
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20554..20970
DNA (417bp) protein (139aa)
Biopolymer transport protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GLD7_9GAMM rbh
Biopolymer transport protein {ECO:0000313|EMBL:EPJ50063.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax s
protein TolR
BD02T64_scaffold_535_19
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20974..21972
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GMJ4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ50064.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
TolA family protein
BD02T64_scaffold_535_20
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21999..23282
DNA (1284bp) protein (428aa)
Protein TolB n=1 Tax=Osedax symbiont Rs2 RepID=S6HXD6_9GAMM rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="O
tolB; translocation protein TolB
BD02T64_scaffold_535_21
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23375..23890
DNA (516bp) protein (172aa)
OmpA/MotB domain-containing protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HM08_9GAMM rbh
OmpA/MotB domain-containing protein {ECO:0000313|EMBL:EPJ50066.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="O
peptidoglycan-associated lipoprotein
BD02T64_scaffold_535_22
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23923..24603
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GRF9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ50067.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
tol-pal system YbgF-like protein
BD02T64_scaffold_535_23
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24755..25444
DNA (690bp) protein (230aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Osedax symbiont Rs2 RepID=S6GLE0_9GAMM rbh
exsB protein
BD02T64_scaffold_535_24
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25745..26797
DNA (1053bp) protein (351aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassifie
nadA; quinolinate synthetase NadA (EC:2.5.1.72)
Quinolinate synthetase n=1 Tax=Osedax symbiont Rs2 RepID=S6I131_9GAMM rbh
BD02T64_scaffold_535_25
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26877..27266)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HQC3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ54350.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_535_26
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27425..28615)
DNA (1191bp) protein (397aa)
Aspartate aminotransferase n=1 Tax=Osedax symbiont Rs2 RepID=S6GTK0_9GAMM rbh
Aspartate aminotransferase {ECO:0000313|EMBL:EPJ54351.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax sym
aspartate aminotransferase
BD02T64_scaffold_535_27
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28667..29188)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GQL5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49435.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
nucleoprotein/polynucleotide-associated enzyme
BD02T64_scaffold_535_28
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29488..29685)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6I134_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ54354.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
BD02T64_scaffold_535_29
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30069..30791
DNA (723bp) protein (241aa)
Probable transcriptional regulatory protein OFPI_07310 n=1 Tax=Osedax symbiont Rs2 RepID=S6GTK4_9GAMM rbh
Probable transcriptional regulatory protein OFPI_07310 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanosp
hypothetical protein
BD02T64_scaffold_535_30
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30848..31462)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GNR8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ54357.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
putative threonine efflux protein
Displaying items 1-30 of 49 in total

View Taxonomy