ggKbase home page

BD02T64_scaffold_3773

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3773_1
R_Alphaproteobacteria_41_14, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..160
DNA (159bp) protein (53aa)
gmhA; Phosphoheptose isomerase (EC:5.3.1.-)
Phosphoheptose isomerase id=3528942 bin=GWA1_Alphaproteobacteria_45_9 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
gmhA; phosphoheptose isomerase Tax=RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated
BD02T64_scaffold_3773_2
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164..1645
DNA (1482bp) protein (494aa)
Bifunctional protein HldE n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GQ67_9PROT rbh
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source
D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase
BD02T64_scaffold_3773_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1647..2636
DNA (990bp) protein (330aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252, ECO:0000313|EMBL:CDO58234.1}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236, ECO:0000313|EMBL:CDO58234.1};; TaxID=1458461 species
hldD; ADP-L-glycero-D-mannoheptose-6-epimerase (EC:5.1.3.20)
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Schlesneria paludicola RepID=UPI00029ADD01 rbh
BD02T64_scaffold_3773_4
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2633..3052)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1U8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY00508.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
hypothetical protein
BD02T64_scaffold_3773_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3049..3417)
DNA (369bp) protein (123aa)
HTH-type transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYN4_AZOS1
HTH-type transcriptional regulator
HTH-type transcriptional regulator {ECO:0000313|EMBL:BAI73513.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azos
BD02T64_scaffold_3773_6
unknown

Not on your lists

comp(3433..4110)
DNA (678bp) protein (226aa)
Smr domain protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KLG4_MICAA
smr domain-containing protein
DNA mismatch repair protein MutS {ECO:0000313|EMBL:CPR17037.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicro
BD02T64_scaffold_3773_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4100..4780)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K6K0_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE78484.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
hypothetical protein
BD02T64_scaffold_3773_8
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4777..6207)
DNA (1431bp) protein (477aa)
Putative iron-sulfur binding protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIJ4_NEPCE
(Fe-S)-binding protein {ECO:0000313|EMBL:KGK43240.1}; TaxID=1545442 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. A-D6.;"
lutB; Iron-sulfur cluster binding protein
BD02T64_scaffold_3773_9
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6204..6980)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037C8ACA
Fe-S oxidoreductase {ECO:0000313|EMBL:KJV10138.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
BD02T64_scaffold_3773_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7047..8279)
DNA (1233bp) protein (411aa)
mltA; membrane-bound lytic murein transglycosylase A (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase A n=1 Tax=Oceanibaculum indicum P24 RepID=K2JV91_9PROT
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:EKE78487.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;
BD02T64_scaffold_3773_11
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8289..8978)
DNA (690bp) protein (230aa)
Import inner membrane translocase, subunit Tim44 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CL9_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KJS41212.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium
import inner membrane translocase subunit Tim44
BD02T64_scaffold_3773_12
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9147..9671
DNA (525bp) protein (175aa)
Phage T7 F exclusion suppressor FxsA n=1 Tax=Oceanibaculum indicum P24 RepID=K2K6K7_9PROT rbh
Phage T7 F exclusion suppressor FxsA {ECO:0000313|EMBL:EKE78489.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="
FxsA cytoplasmic membrane protein
BD02T64_scaffold_3773_13
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9806..10294
DNA (489bp) protein (163aa)
Protein-export protein SecB n=1 Tax=Bartonella bovis 91-4 RepID=N6VHT3_9RHIZ rbh
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
secB; preprotein translocase subunit SecB
BD02T64_scaffold_3773_14

Not on your lists

comp(10349..10774)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9ECB2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKM00278.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_3773_15
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10764..11105)
DNA (342bp) protein (114aa)
Transcriptional regulator, ArsR family n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NP37_9RHOB
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIC42197.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger
ArsR family transcriptional regulator
BD02T64_scaffold_3773_16
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11243..11911)
DNA (669bp) protein (223aa)
dnaQ; DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SEL8_PHAFV rbh
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EPY03164.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="
BD02T64_scaffold_3773_17
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11904..12140)
DNA (237bp) protein (79aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1605283 species="Bacteria; P
Dephospho-CoA kinase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P9K7_9SPHN
Displaying 17 items

View Taxonomy