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BD02T64_scaffold_3896

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3896_1
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..2198)
DNA (2196bp) protein (732aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=342108 species="Bacteria; Proteobacteria; Alph
Ribonuclease R n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W8Z4_MAGSA
exoribonuclease R
BD02T64_scaffold_3896_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2233..4878)
DNA (2646bp) protein (882aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CCQ75091.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1288970
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H551_9PROT
BD02T64_scaffold_3896_3
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4945..6066)
DNA (1122bp) protein (374aa)
Predicted Rossmann fold nucleotide-binding protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9J0_MAGSA rbh
DNA processing protein DprA {ECO:0000313|EMBL:KJS42748.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacter
Rossmann fold nucleotide-binding protein
BD02T64_scaffold_3896_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6145..6792)
DNA (648bp) protein (216aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1E0_9PROT rbh
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
hypothetical protein
BD02T64_scaffold_3896_5
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6795..8096)
DNA (1302bp) protein (434aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000313|EMBL:CDO61425.1}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000313|EMBL:CDO61425.1
Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SM65_RHOPH
BD02T64_scaffold_3896_6
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8093..9040)
DNA (948bp) protein (316aa)
aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Aspartate carbamoyltransferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=PYRB_MAGSA
pyrB; aspartate carbamoyltransferase
BD02T64_scaffold_3896_7

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9289..10854
DNA (1566bp) protein (522aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Sensor protein n=1 Tax=uncultured bacterium RepID=C5JB81_9BACT
PAS/PAC sensor hybrid histidine kinase
BD02T64_scaffold_3896_8
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10851..11306)
DNA (456bp) protein (152aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1492281 speci
Putative Holliday junction resolvase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX15_PARL1
Holliday junction resolvase YqgF
BD02T64_scaffold_3896_9
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11417..11704
DNA (288bp) protein (96aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000255|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000255|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037D0A44 rbh
Displaying 9 items

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