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BD02T64_scaffold_881

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_881_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..590)
DNA (588bp) protein (196aa)
Metallochaperone n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR89_9PROT
Metallochaperone {ECO:0000313|EMBL:EKE72969.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicu
cobalamin synthesis protein, P47K
BD02T64_scaffold_881_2
Rhodobacteraceae bacterium HIMB11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(587..2218)
DNA (1632bp) protein (544aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V9P2_9RHOB rbh
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:ERL99420.1}; TaxID=1366046 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rho
amidohydrolase
BD02T64_scaffold_881_3
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2325..3266
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BA06_PARDP rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABL72350.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Para
BD02T64_scaffold_881_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3386..4960
DNA (1575bp) protein (525aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RMQ2_9RHOB rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETX03298.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus En
family 5 extracellular solute-binding protein
BD02T64_scaffold_881_5
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5004..5981
DNA (978bp) protein (326aa)
ABC transporter permease n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F196 rbh
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABL72348.1}; Flags: Precursor;; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
BD02T64_scaffold_881_6
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5983..6861
DNA (879bp) protein (293aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BA03_PARDP rbh
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABL72347.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
BD02T64_scaffold_881_7
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6861..7850
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003709C35 rbh
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABL72346.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus
BD02T64_scaffold_881_8
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7850..8815
DNA (966bp) protein (322aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003755A1C rbh
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABL72345.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus
BD02T64_scaffold_881_9
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8851..10212)
DNA (1362bp) protein (454aa)
Probable cation efflux system protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SZQ2_9RHOB
Cation transporter {ECO:0000313|EMBL:KJS31495.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea
cation efflux pump (multidrug resistance protein)
BD02T64_scaffold_881_10
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10336..10788
DNA (453bp) protein (151aa)
HxlR family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI000361A07E
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:CDO59111.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomari
hypothetical protein
BD02T64_scaffold_881_11
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10900..12063
DNA (1164bp) protein (388aa)
Transcriptional regulator, LuxR-family n=2 Tax=Burkholderiaceae RepID=Q0K3J2_CUPNH
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJK20890.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae
LuxR family transcriptional regulator
BD02T64_scaffold_881_12
unknown

Not on your lists

12189..12515
DNA (327bp) protein (109aa)

This feature has no annotations

BD02T64_scaffold_881_13
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12592..13644)
DNA (1053bp) protein (351aa)
zinc-binding dehydrogenase family protein 6 n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002629234
alcohol dehydrogenase
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABS64949.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvib
BD02T64_scaffold_881_14
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13797..14423
DNA (627bp) protein (209aa)
Lysine exporter protein LysE/YggA n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N1C5_9RHIZ rbh
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EKF18018.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitrat
putative amino-acid efflux transporter
BD02T64_scaffold_881_15
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14540..14965
DNA (426bp) protein (142aa)
MarR family transcriptional regulator n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI0003745034
transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:BAO83842.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
BD02T64_scaffold_881_16
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15012..16319
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E765CF
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:EHB56218.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" sou
4Fe-4S ferredoxin
BD02T64_scaffold_881_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16333..17373)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035DD5F3
putative Ammonia monooxygenase
Putative Ammonia monooxygenase {ECO:0000313|EMBL:CCC99091.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospir
BD02T64_scaffold_881_18
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17382..18899)
DNA (1518bp) protein (506aa)
tripartite tricarboxylate transporter TctA n=1 Tax=Ruegeria conchae RepID=UPI0002379457
Tripartite tricarboxylate transporter TctA {ECO:0000313|EMBL:KIC49868.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source
hypothetical protein
BD02T64_scaffold_881_19
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18915..19394)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7EJZ7_PHAIB
Membrane protein {ECO:0000313|EMBL:KII14241.1}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter sp. S26.;"
hypothetical protein
BD02T64_scaffold_881_20
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19465..20448)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R534_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEE47059.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia a
tricarboxylic transport TctC
BD02T64_scaffold_881_21
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20650..21783)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000367A68F
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAK68899.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
ABC transporter, substrate binding protein (iron)
BD02T64_scaffold_881_22
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21894..22559
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000371134D
Transcriptional regulator {ECO:0000313|EMBL:KJE34711.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospi
response regulator receiver:transcriptional regulatory protein, C-terminal
BD02T64_scaffold_881_23
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22559..23935
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003670ED1
two-component sensor histidine kinase
BD02T64_scaffold_881_24
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23989..24273)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CWW8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KAJ57531.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium m
BD02T64_scaffold_881_25
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24383..25252
DNA (870bp) protein (290aa)
LysR family transcriptional regulator n=2 Tax=Labrenzia RepID=U7GM35_9RHOB
LysR family transcriptional regulator {ECO:0000313|EMBL:ERP98839.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labre
LysR family transcriptional regulator
BD02T64_scaffold_881_26
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25402..26127
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y7Z0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAQ66720.1}; TaxID=314277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. MED121.;"
BD02T64_scaffold_881_27
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26396..26971
DNA (576bp) protein (192aa)
Transcriptional regulator, AcrR family protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3S8M6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO53546.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
TetR family transcriptional regulator
BD02T64_scaffold_881_28
unknown

Not on your lists

27030..27560
DNA (531bp) protein (177aa)

This feature has no annotations

BD02T64_scaffold_881_29
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27845..28816
DNA (972bp) protein (324aa)
Metal-dependent hydrolase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6W4S5_9ALTE rbh
metal-dependent hydrolase Tax=GWA2_Rhodocyclales_65_20_curated
metal-dependent hydrolase
BD02T64_scaffold_881_30
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28883..29821)
DNA (939bp) protein (313aa)
Glycine cleavage system transcriptional activator n=1 Tax=Marinobacter sp. BSs20148 RepID=M1F888_9ALTE rbh
gcvA; glycine cleavage system transcriptional activator
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:AFP30971.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;"
Displaying items 1-30 of 40 in total

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