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BD02T64_scaffold_2425

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2425_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..696)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000373E82B
Flagellar hook protein FlgE {ECO:0000313|EMBL:EJW11914.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp.
flgE; flagellar hook protein FlgE
BD02T64_scaffold_2425_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(754..1416)
DNA (663bp) protein (221aa)
Flagellar basal-body rod modification protein FlgD n=1 Tax=Oceanibaculum indicum P24 RepID=K2JEA9_9PROT rbh
flgD; flagellar basal-body rod modification protein FlgD
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:EKE68954.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibacul
BD02T64_scaffold_2425_3
unknown

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comp(1530..2063)
DNA (534bp) protein (178aa)

This feature has no annotations

BD02T64_scaffold_2425_4
unknown

Not on your lists

comp(2076..2510)
DNA (435bp) protein (145aa)

This feature has no annotations

BD02T64_scaffold_2425_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2520..3116)
DNA (597bp) protein (199aa)
RNA polymerase sigma factor n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VEX5_RHOPX rbh
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
BD02T64_scaffold_2425_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3235..3684)
DNA (450bp) protein (150aa)
Putative Flagellar protein FliS-like n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AY62_AZOBR rbh
flagellar biosynthesis protein FliS
Putative Flagellar protein FliS-like {ECO:0000313|EMBL:CCD02821.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="A
BD02T64_scaffold_2425_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3697..5379)
DNA (1683bp) protein (561aa)
Flagellar hook-associated protein FliD n=1 Tax=Rhodovulum sp. PH10 RepID=J6J7B1_9RHOB rbh
Flagellar hook-associated protein FliD {ECO:0000313|EMBL:EJW11920.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rho
flagellar hook-associated 2 domain-containing protein
BD02T64_scaffold_2425_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5506..6336)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035DF0D0 rbh
fliC; flagellin rbh
Flagellin {ECO:0000313|EMBL:CCD02823.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp24
BD02T64_scaffold_2425_9
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6576..7847
DNA (1272bp) protein (424aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012, ECO:0000313|EMBL:CCF19258.1};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=391 speci
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036531B2 rbh
threonine dehydratase
BD02T64_scaffold_2425_10
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7865..8461
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEH1_DESAA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL06952.1}; Flags: Precursor;; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.
BD02T64_scaffold_2425_11
unknown

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8458..9075
DNA (618bp) protein (206aa)

This feature has no annotations

BD02T64_scaffold_2425_12
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9204..10265
DNA (1062bp) protein (354aa)
Putative Membrane Spanning Protein n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PPT4_PSEUV rbh
putative Membrane Spanning Protein
Putative Membrane Spanning Protein {ECO:0000313|EMBL:AEV35853.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudo
BD02T64_scaffold_2425_13

Not on your lists

comp(10304..10468)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000372E5E8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN71006.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_2425_14
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10679..11992)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FAW0_9RHOB
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJS15789.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BR
TRAP C4-dicarboxylate transport system permease DctM
BD02T64_scaffold_2425_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11995..12522)
DNA (528bp) protein (176aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Oceanibaculum indicum P24 RepID=K2KCP0_9PROT rbh
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:EKE75060.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceani
hypothetical protein
BD02T64_scaffold_2425_16
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12613..13620)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TK35_9RHIZ rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS15788.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoefl
extracellular solute-binding protein
BD02T64_scaffold_2425_17
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13882..14541
DNA (660bp) protein (220aa)
Transcriptional regulator, GntR family n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PEL7_9BURK rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ELX09293.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" sourc
GntR family transcriptional regulator
BD02T64_scaffold_2425_18
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14611..16116
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003746E6C rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ16202.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
malonyl-CoA synthase
BD02T64_scaffold_2425_19
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16201..17670
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036F5970
Malonyl-CoA decarboxylase {ECO:0000313|EMBL:EKV29519.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispiri
matA; malonyl-CoA decarboxylase
BD02T64_scaffold_2425_20
unknown

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17690..18163
DNA (474bp) protein (158aa)

This feature has no annotations

BD02T64_scaffold_2425_21

Not on your lists

comp(18139..18246)
DNA (108bp) protein (36aa)
Transposase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y849_9GAMM
Marine sediment metagenome DNA, contig: S01H4_S09672 {ECO:0000313|EMBL:GAG93080.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Displaying 21 items

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