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BD02T64_scaffold_4872

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_4872_1
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..503
DNA (501bp) protein (167aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M0P7_9PROT rbh
BD02T64_scaffold_4872_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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500..1129
DNA (630bp) protein (210aa)
ruvA; Component of RuvABC resolvasome, regulatory subunit (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036A7AA5 rbh
BD02T64_scaffold_4872_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1126..2172
DNA (1047bp) protein (349aa)
ruvB; Holliday junction DNA helicase ruvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016, ECO:0000313|EMBL:CDK97992.1};; TaxID=1430440 species="Bacteria; Prote
Holliday junction DNA helicase ruvB n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXY0_9PROT
BD02T64_scaffold_4872_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2162..2638
DNA (477bp) protein (159aa)
small, thioesterase-like enzyme subunit; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XS77_9PROT
putative thioesterase
BD02T64_scaffold_4872_5
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2638..3357
DNA (720bp) protein (240aa)
TolQ protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FNV3_PHAMO
TolQ protein {ECO:0000313|EMBL:CCG40041.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischi
biopolymer transport protein
BD02T64_scaffold_4872_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3363..3824
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036E9761
tolR_exbD; Membrane spanning protein TolR/ExbD
Biopolymer transport protein {ECO:0000313|EMBL:EKE67318.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceaniba
BD02T64_scaffold_4872_7
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3839..4774
DNA (936bp) protein (312aa)
Periplasmic protein TonB n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KND6_9PROT rbh
Energy transducer TonB {ECO:0000313|EMBL:KJE35156.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira
periplasmic protein TonB
BD02T64_scaffold_4872_8
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4777..6129
DNA (1353bp) protein (451aa)
Protein TolB n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVZ4_9PROT rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="
tolB; translocation protein TolB
BD02T64_scaffold_4872_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6262..6801
DNA (540bp) protein (180aa)
Outer membrane lipoprotein of the Pal-Tol system n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AM26_AZOBR rbh
OmpA/MotB
OmpA/MotB {ECO:0000313|EMBL:AIB11343.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
BD02T64_scaffold_4872_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6987..8042
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JAE1_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE67509.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
hypothetical protein
BD02T64_scaffold_4872_11
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8063..9283
DNA (1221bp) protein (407aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tilS; tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HLY2_9PROT
Displaying 11 items

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