ggKbase home page

BD02T64_scaffold_3004

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3004_1
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..273
DNA (273bp) protein (91aa)
Transposase IS66 n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0LAX3_MAGSM
transposase IS66 Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
transposase
BD02T64_scaffold_3004_2
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(710..1162)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NU63_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHQ57383.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
hypothetical protein
BD02T64_scaffold_3004_3
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1174..1470)
DNA (297bp) protein (99aa)
Metal-dependent hydrolase n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FVL0_9GAMM
Metal-dependent hydrolase {ECO:0000313|EMBL:ERP88933.1}; TaxID=1397527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax s
hypothetical protein
BD02T64_scaffold_3004_4
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1470..2600)
DNA (1131bp) protein (377aa)
Metal-dependent hydrolase n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FVL0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD59811.1}; TaxID=1177181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jad
hypothetical protein
BD02T64_scaffold_3004_5
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2841..3350)
DNA (510bp) protein (170aa)
Short chain dehydrogenase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW83_9GAMM
Short chain dehydrogenase {ECO:0000313|EMBL:EDY86097.1}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
alpha/beta hydrolase fold containing protein
BD02T64_scaffold_3004_6
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3461..3751)
DNA (291bp) protein (97aa)
Short chain dehydrogenase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW83_9GAMM
Short chain dehydrogenase {ECO:0000313|EMBL:EDY86097.1}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
short chain dehydrogenase family protein
BD02T64_scaffold_3004_7
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3794..4981)
DNA (1188bp) protein (396aa)
Monooxygenase, flavin-binding family n=1 Tax=Oleispira antarctica RB-8 RepID=R4YL08_OLEAN
Monooxygenase, flavin-binding family {ECO:0000313|EMBL:CCK75242.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB
flavin-binding family monooxygenase
BD02T64_scaffold_3004_8
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5520..6575
DNA (1056bp) protein (352aa)
Helix-turn-helix-domain containing protein, AraC type n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW86_9GAMM
Helix-turn-helix-domain containing protein, AraC type {ECO:0000313|EMBL:EDY86045.1}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
hypothetical protein
BD02T64_scaffold_3004_9
Acinetobacter sp. CIP 64.2, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6595..7650
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N9PJ28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX17736.1}; TaxID=1217694 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
AraC family transcriptional regulator
BD02T64_scaffold_3004_10
unknown

Not on your lists

comp(7672..9249)
DNA (1578bp) protein (526aa)

This feature has no annotations

BD02T64_scaffold_3004_11
unknown

Not on your lists

comp(9549..9857)
DNA (309bp) protein (103aa)

This feature has no annotations

BD02T64_scaffold_3004_12
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9869..10477)
DNA (609bp) protein (203aa)
Cytochrome c oxidase subunit III n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HYU2_MYCRH
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EHB55478.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS
heme/copper-type cytochrome/quinol oxidase, subunit 3
BD02T64_scaffold_3004_13
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10492..11238)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HTC3_MYCRH
Uncharacterized protein {ECO:0000313|EMBL:KJS08985.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
membrane protein
BD02T64_scaffold_3004_14
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11247..12713)
DNA (1467bp) protein (489aa)
Monooxygenase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WMQ0_MYCKA
monooxygenase
Monooxygenase {ECO:0000313|EMBL:AGZ50222.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii ATCC 12478.;"
BD02T64_scaffold_3004_15
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12949..14052
DNA (1104bp) protein (368aa)
AraC family transcriptional regulator n=5 Tax=Alteromonadaceae RepID=K7RZ05_ALTMA
AraC family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AGP99548.1}; TaxID=1300258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macle
BD02T64_scaffold_3004_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14049..15119)
DNA (1071bp) protein (357aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISN7_RHOP2
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABD08773.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
Displaying 16 items

View Taxonomy