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BD02T64_scaffold_1370

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1370_1
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144..995)
DNA (852bp) protein (284aa)
ABC transporter, permease protein, MalFG family protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GQM9_9GAMM rbh
ABC transporter, permease protein, MalFG family protein {ECO:0000313|EMBL:EPJ55392.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospiri
sugar ABC transporter permease
BD02T64_scaffold_1370_2
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(997..1887)
DNA (891bp) protein (297aa)
Putative sugar ABC transporter, permease protein n=1 Tax=Osedax symbiont Rs2 RepID=S6I226_9GAMM rbh
Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:EPJ55393.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae
sugar ABC transporter permease
BD02T64_scaffold_1370_3
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2008..3255)
DNA (1248bp) protein (416aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HRB3_9GAMM rbh
Putative sugar uptake ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:EPJ55394.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclass
putative carbohydrate ABC transporter, substrate-binding protein
BD02T64_scaffold_1370_4
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3473..4657
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GU41_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ55395.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
ROK family protein
BD02T64_scaffold_1370_5
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4818..5729)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Octadecabacter arcticus 238 RepID=M9RT84_9RHOB
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AGI73020.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="O
BD02T64_scaffold_1370_6
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5861..6583
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00037A1BB4
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KJD32431.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedim
hypothetical protein
BD02T64_scaffold_1370_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6680..7579)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037DF1E9
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGJ96890.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
LysR family transcriptional regulator
BD02T64_scaffold_1370_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7744..8508
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000365E473
Uncharacterized protein {ECO:0000313|EMBL:KGJ96891.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
conserved protein of unknown function
BD02T64_scaffold_1370_9
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8909..9118
DNA (210bp) protein (70aa)
Cold shock-like protein CspG n=1 Tax=Osedax symbiont Rs1 RepID=S6GK45_9GAMM
Cold shock-like protein CspG {ECO:0000313|EMBL:EPJ49239.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax s
cold-shock DNA-binding protein family
BD02T64_scaffold_1370_10
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9250..10128)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GGB4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ46226.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_1370_11
Shewanella violacea, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10372..10578
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZAE9_SHEVD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ02994.1}; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (
BD02T64_scaffold_1370_12
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10571..11350
DNA (780bp) protein (260aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Oleispira antarctica RB-8 RepID=R4YKG4_OLEAN rbh
BD02T64_scaffold_1370_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11354..11656
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:CEL20274.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
BD02T64_scaffold_1370_14
Pseudoalteromonas spongiae, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11664..13001)
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1117319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonad
Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M396_9GAMM
Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein
BD02T64_scaffold_1370_15
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13322..14185)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037445B0 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJE33638.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source=
LysR family transcriptional regulator
BD02T64_scaffold_1370_16
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14289..14918
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI0003655D9A rbh
lysine exporter protein LysE/YggA
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:AJD54164.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Tha
BD02T64_scaffold_1370_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15135..17171)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HT15_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EQM77138.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
ammonium transporter
BD02T64_scaffold_1370_18
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17517..18734
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GCM6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ44020.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
adenylate/guanylate cyclase
BD02T64_scaffold_1370_19
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18731..21073
DNA (2343bp) protein (781aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GGZ9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ44019.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
MscS family protein YbiO
BD02T64_scaffold_1370_20
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21369..21614)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6H7Z8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ44018.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
BD02T64_scaffold_1370_21
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21686..22219)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HGD5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ44017.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
sigZ; RNA polymerase sigma factor SigZ (sigma Z)
BD02T64_scaffold_1370_22
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22342..22968
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GDD7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ44016.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_1370_23
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23056..23865
DNA (810bp) protein (270aa)
N-formylglutamate deformylase (EC:3.5.1.68)
N-formylglutamate deformylase n=1 Tax=Osedax symbiont Rs2 RepID=S6GCM4_9GAMM rbh
N-formylglutamate deformylase {ECO:0000313|EMBL:EPJ44015.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax
BD02T64_scaffold_1370_24
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23862..25232
DNA (1371bp) protein (457aa)
N-formimino-L-glutamate deiminase n=1 Tax=Osedax symbiont Rs1 RepID=S6GJN2_9GAMM rbh
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:EPJ48929.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Ose
N-formimino-L-glutamate deiminase
BD02T64_scaffold_1370_25
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25280..25843)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GP77_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ55042.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
GCN5-like N-acetyltransferase
BD02T64_scaffold_1370_26
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26063..26719
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GQJ1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ55043.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
transcription negative regulator
BD02T64_scaffold_1370_27
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26762..27733)
DNA (972bp) protein (324aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Osedax symbiont Rs2 RepID=S6I1X0_9GAMM rbh
elaC; binuclear zinc phosphodiesterase
BD02T64_scaffold_1370_28
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27922..28596)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HR66_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ55045.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_1370_29
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28790..29044
DNA (255bp) protein (85aa)
Acetyltransferase gnat family n=1 Tax=Vibrio nigripulchritudo SOn1 RepID=U4JIW5_9VIBR
acetyltransferase family protein
Uncharacterized protein {ECO:0000313|EMBL:EDM68456.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
Displaying 29 items

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