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BD02T64_scaffold_2478

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2478_1
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..620)
DNA (618bp) protein (206aa)
FAD/FMN-containing dehydrogenase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFG9_9GAMM
FAD/FMN-containing dehydrogenase {ECO:0000313|EMBL:EAW30383.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC
FAD/FMN-containing dehydrogenase
BD02T64_scaffold_2478_2
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

740..1768
DNA (1029bp) protein (343aa)
Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMW7_DESAA
AraC family transcriptional regulator
Tax=BJP_08E140C01_Syntrophobacterales_43_19
BD02T64_scaffold_2478_3
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1929..2165
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KDZ3_9GAMM
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CED60552.1}; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella viscosa.;"
BD02T64_scaffold_2478_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2360..2680
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AM9_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ97623.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
BD02T64_scaffold_2478_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2824..3132
DNA (309bp) protein (103aa)
reductase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B60033
Uncharacterized protein {ECO:0000313|EMBL:KGJ98513.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
fdx; 2Fe-2S ferredoxin
BD02T64_scaffold_2478_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3269..3700)
DNA (432bp) protein (144aa)
Globin, protozoan/cyanobacterial family n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0SGL4_9DELT
Globin {ECO:0000313|EMBL:KGJ87684.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychro
globin
BD02T64_scaffold_2478_7
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4242..4511
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6YWZ7_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE44562.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
BD02T64_scaffold_2478_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4586..4948
DNA (363bp) protein (121aa)
Fis family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI00037B4734
Response regulator receiver protein {ECO:0000313|EMBL:KGJ87682.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
cheY; chemotaxis response regulator
BD02T64_scaffold_2478_9
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4955..7051
DNA (2097bp) protein (699aa)
cheA; CheA signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae;
Two-component system, chemotaxis family, sensor kinase CheA n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6Y6T0_9ALTE
BD02T64_scaffold_2478_10
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7051..7578
DNA (528bp) protein (176aa)
CheW protein n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QHE0_GLANF
Chemotaxis protein CheW {ECO:0000313|EMBL:KJE38946.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
cheW; CheW protein
BD02T64_scaffold_2478_11
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7596..8090
DNA (495bp) protein (165aa)
Purine-binding chemotaxis protein CheW n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6ZDT4_9ALTE
Chemotaxis protein CheW {ECO:0000313|EMBL:KJE44559.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
cheW; CheW protein
BD02T64_scaffold_2478_12
Vibrio sp. B183, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8111..9436
DNA (1326bp) protein (442aa)
Chemotaxis protein n=1 Tax=Vibrio coralliilyticus OCN008 RepID=U0FTN1_9VIBR
chemotaxis protein
Chemotaxis protein {ECO:0000313|EMBL:KFI13080.1}; TaxID=1526762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. B183.;"
BD02T64_scaffold_2478_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9426..11324
DNA (1899bp) protein (633aa)
Methyl-accepting chemotaxis protein n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6YWZ2_9ALTE
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:KGJ87678.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
putative Methyl-accepting chemotaxis protein (MCP) fused with PAS/PAC domain
BD02T64_scaffold_2478_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11343..12230
DNA (888bp) protein (296aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
cheR; CheR-type MCP methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6ZYX4_9ALTE
BD02T64_scaffold_2478_15
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12230..12895
DNA (666bp) protein (222aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6Y6S4_9ALTE
cheD; chemotaxis protein CheD
BD02T64_scaffold_2478_16
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12936..14024
DNA (1089bp) protein (363aa)
cheB; chemotaxis-specific methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1085623 species="Bacteria; Proteobacteria; Gamma
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QLA9_GLANF
BD02T64_scaffold_2478_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14011..15201
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036ED673
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:KGJ87674.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
mcp; methyl-accepting chemotaxis sensory transducer rbh
BD02T64_scaffold_2478_18
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15261..15569
DNA (309bp) protein (103aa)
Anti-sigma factor antagonist, putative n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6YWY9_9ALTE rbh
Anti-sigma factor antagonist {ECO:0000313|EMBL:KJE44556.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas
anti-sigma factor antagonist
BD02T64_scaffold_2478_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15573..17309
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037C6FC7
Response regulator receiver protein {ECO:0000313|EMBL:KGJ87672.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
sensor histidine kinase/response regulator rbh
BD02T64_scaffold_2478_20
unknown

Not on your lists

17279..17377
DNA (99bp) protein (33aa)

This feature has no annotations

BD02T64_scaffold_2478_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17371..18573
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037C8D3E
Response regulator receiver protein {ECO:0000313|EMBL:KGJ87671.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
response regulator receiver protein
BD02T64_scaffold_2478_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18570..21092
DNA (2523bp) protein (841aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003771321
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:KGJ87670.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
sensory box sensor histidine kinase/response regulator
BD02T64_scaffold_2478_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21454..21759
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485T0_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ91433.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_2478_24
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22469..25084
DNA (2616bp) protein (872aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037998D3
PKD domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
BD02T64_scaffold_2478_25
unknown

Not on your lists

comp(25268..25537)
DNA (270bp) protein (90aa)

This feature has no annotations

BD02T64_scaffold_2478_26
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25713..26393)
DNA (681bp) protein (227aa)
carboxylesterase (EC:3.1.1.1)
Carboxylesterase {ECO:0000313|EMBL:ACA86234.1}; EC=3.1.1.1 {ECO:0000313|EMBL:ACA86234.1};; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewane
Carboxylesterase n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KQJ5_SHEWM
BD02T64_scaffold_2478_27
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26971..27162)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000379FA52
Uncharacterized protein {ECO:0000313|EMBL:KJE41177.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
Displaying 27 items

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