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BD02T64_scaffold_1128

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1128_1
unknown

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

BD02T64_scaffold_1128_2
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

443..1825
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000368F3AA
amino acid permease-associated protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
amino acid permease
BD02T64_scaffold_1128_3
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1902..3116)
DNA (1215bp) protein (405aa)
Formyl-CoA transferase {ECO:0000313|EMBL:KGK01086.1}; EC=2.8.3.16 {ECO:0000313|EMBL:KGK01086.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
coaT; Formyl-coenzyme A transferase (EC:2.8.3.16)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GRC0_9GAMM rbh
BD02T64_scaffold_1128_4
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3116..4297)
DNA (1182bp) protein (394aa)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:GAC21761.1}; EC=1.3.8.6 {ECO:0000313|EMBL:GAC21761.1};; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadac
Glutaryl-CoA dehydrogenase n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YCU3_9ALTE rbh
gcdH; glutaryl-CoA dehydrogenase
BD02T64_scaffold_1128_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4429..5310
DNA (882bp) protein (294aa)
Substrate-binding transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47V66_COLP3
LysR family transcriptional regulator
Substrate-binding transcriptional regulator, LysR family {ECO:0000313|EMBL:AAZ26389.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;
BD02T64_scaffold_1128_6
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5386..6276)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KQS2_SHEWM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA87678.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
BD02T64_scaffold_1128_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6970..7887)
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI0003741CDB
Uncharacterized protein {ECO:0000313|EMBL:KGK01087.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
LysR family transcriptional regulator
BD02T64_scaffold_1128_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7987..9444
DNA (1458bp) protein (486aa)
Succinic semialdehyde dehydrogenase {ECO:0000313|EMBL:KGJ94416.1}; EC=1.2.1.24 {ECO:0000313|EMBL:KGJ94416.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colw
gabD1; succinate-semialdehyde dehydrogenase (EC:1.2.1.16)
succinate-semialdehyde dehdyrogenase n=1 Tax=Colwellia piezophila RepID=UPI000360409B
BD02T64_scaffold_1128_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9498..10784
DNA (1287bp) protein (429aa)
(S)-3-amino-2-methylpropionate transaminase {ECO:0000313|EMBL:KGK01090.1}; EC=2.6.1.22 {ECO:0000313|EMBL:KGK01090.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonad
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47V64_COLP3
BD02T64_scaffold_1128_10
unknown

Not on your lists

10795..11076
DNA (282bp) protein (94aa)

This feature has no annotations

BD02T64_scaffold_1128_11
Aliivibrio wodanis, Aliivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11268..12332)
DNA (1065bp) protein (355aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4I5B5_9GAMM rbh
putative membrane associated regulator, GGDEF family protein rbh
Putative membrane associated regulator, GGDEF family protein {ECO:0000313|EMBL:CED71842.1}; TaxID=80852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.;"
BD02T64_scaffold_1128_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12459..13100)
DNA (642bp) protein (214aa)
Transcriptional regulator, TetR family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YV3_COLP3
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AAZ26817.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
BD02T64_scaffold_1128_13
Ferrimonas balearica, Ferrimonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13337..14383)
DNA (1047bp) protein (349aa)
Transcriptional regulator, AraC family n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SUG3_FERBD rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADN77270.1}; TaxID=550540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferrimonas.;" source="Ferri
BD02T64_scaffold_1128_14
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14606..17020)
DNA (2415bp) protein (805aa)
TonB-dependent receptor n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KKZ9_SHEWM rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACA88805.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
BD02T64_scaffold_1128_15
Pseudomonas sp. HMP271, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17439..18932
DNA (1494bp) protein (498aa)
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.3) rbh
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037DE51B rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGK85727.1}; TaxID=1487922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HM
BD02T64_scaffold_1128_16
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19234..21678
DNA (2445bp) protein (815aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003677085
TonB-dependent receptor domain protein {ECO:0000313|EMBL:EEB78198.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium
TonB-dependent receptor plug
BD02T64_scaffold_1128_17
bacterium YEK0313, Bacteria

Not on your lists

comp(22069..23289)
DNA (1221bp) protein (407aa)
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000365B28E rbh
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:CEJ10490.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
BD02T64_scaffold_1128_18
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23286..24167)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036C748D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU97868.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BC
BD02T64_scaffold_1128_19
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24615..25442
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI0003698654 rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KJE46365.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thala
AraC family transcriptional regulator
BD02T64_scaffold_1128_20
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25527..26258
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI0003659D77 rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJE40101.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;"
amino acid permease
BD02T64_scaffold_1128_21
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26255..26572
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI00037B2F7E rbh
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KJE46366.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="T
hypothetical protein
BD02T64_scaffold_1128_22

Not on your lists

comp(26562..27116)
DNA (555bp) protein (185aa)
cro regulatory protein n=1 Tax=Hahella ganghwensis RepID=UPI00035D67AA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO06546.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
XRE family transcriptional regulator
BD02T64_scaffold_1128_23
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27308..28612
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI0003795F29
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KEI70969.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomona
FAD dependent oxidoreductase
BD02T64_scaffold_1128_24
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28686..30410
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003692325
Amidohydrolase 3 {ECO:0000313|EMBL:EED33019.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
putative TIM-barrel fold metal-dependent hydrolase
BD02T64_scaffold_1128_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30468..31829
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484S5_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27457.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1128_26
Trabulsiella guamensis, Trabulsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31960..32442
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI00036E670C
Uncharacterized protein {ECO:0000313|EMBL:KFB99848.1}; TaxID=1005994 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Trabulsiella.;" source="Trabulsiella
hypothetical protein
BD02T64_scaffold_1128_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32826..33398
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003799B25 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ95171.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1128_28
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33473..33616)
DNA (144bp) protein (48aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Glaciecola psychrophila 170 RepID=K7ARW2_9ALTE
short-chain alcohol dehydrogenase
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:AGH44462.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Para
Displaying 28 items

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