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BD02T64_scaffold_1015

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1015_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..506)
DNA (504bp) protein (168aa)
30S ribosomal protein S2 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RS2_COLP3
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
rpsB; 30S ribosomal protein S2
BD02T64_scaffold_1015_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

895..1533
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000366A04A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27171.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1015_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1561..2349
DNA (789bp) protein (263aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485H3_COLP3
BD02T64_scaffold_1015_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2427..5063
DNA (2637bp) protein (879aa)
glnD; protein-P-II uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=GLND_COLP3
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000255|HAMAP-Rule:MF_00277}; Short=UTase/UR {ECO:0000255|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000
BD02T64_scaffold_1015_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5105..5938
DNA (834bp) protein (278aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000255|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000255|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=DAPD_COLP3
BD02T64_scaffold_1015_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6093..7610)
DNA (1518bp) protein (506aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:KGJ96204.1}; EC=4.2.1.2 {ECO:0000313|EMBL:KGJ96204.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteob
fumarate hydratase n=1 Tax=Colwellia piezophila RepID=UPI000366A9C8
fumarate hydratase, class I
BD02T64_scaffold_1015_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7765..9252
DNA (1488bp) protein (496aa)
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:KGJ93040.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KGJ93040.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; C
Para-aminobenzoate synthase, component I n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y38_COLP3
pabB; para-aminobenzoate synthase component I
BD02T64_scaffold_1015_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9256..9834
DNA (579bp) protein (193aa)
MutT/nudix family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y37_COLP3
NUDIX hydrolase {ECO:0000313|EMBL:KGJ96206.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibri
MutT/nudix family protein
BD02T64_scaffold_1015_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10001..11377
DNA (1377bp) protein (459aa)
sdaA; L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase {ECO:0000313|EMBL:AAZ25704.1}; EC=4.3.1.17 {ECO:0000313|EMBL:AAZ25704.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; C
L-serine ammonia-lyase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y35_COLP3
BD02T64_scaffold_1015_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11485..12459)
DNA (975bp) protein (325aa)
Cys regulon transcription activator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486S2_COLP3
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGJ91834.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
cysB; transcriptional regulator CysB
BD02T64_scaffold_1015_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12901..13668
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486S3_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ91833.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1015_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13761..14132
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486S4_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ24308.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1015_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14348..17002)
DNA (2655bp) protein (885aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=28229 species="Bacteria; Proteobacte
topA; DNA topoisomerase I (EC:5.99.1.2)
topoisomerase I n=1 Tax=Colwellia piezophila RepID=UPI0003678A99
BD02T64_scaffold_1015_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17391..18497
DNA (1107bp) protein (369aa)
Agmatinase {ECO:0000313|EMBL:KGJ87252.1}; EC=3.5.3.11 {ECO:0000313|EMBL:KGJ87252.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" s
arginase n=1 Tax=Colwellia piezophila RepID=UPI0003639393
arginase
BD02T64_scaffold_1015_15
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18575..20674)
DNA (2100bp) protein (700aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003708AFD
Ig domain-containing protein
Ig-like, group 1 {ECO:0000313|EMBL:ABL99527.1}; Flags: Precursor;; TaxID=326297 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanell
BD02T64_scaffold_1015_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20890..22254
DNA (1365bp) protein (455aa)
Putative proton/glutamate symporter n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486S8_COLP3
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:KGJ91828.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychre
proton/glutamate symporter
BD02T64_scaffold_1015_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22311..23375)
DNA (1065bp) protein (355aa)
sohB; periplasmic protease (EC:3.4.21.-)
SohB protein, peptidase U7 family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486S9_COLP3
Peptidase S49 domain protein {ECO:0000313|EMBL:KGJ87249.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
BD02T64_scaffold_1015_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23494..25944)
DNA (2451bp) protein (817aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036A06CC
Extracellular lipase, Pla-1/cef family {ECO:0000313|EMBL:KGJ87248.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
hypothetical protein
BD02T64_scaffold_1015_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26265..27002
DNA (738bp) protein (246aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486T1_COLP3
short chain dehydrogenase
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:AAZ25434.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia
BD02T64_scaffold_1015_20
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27163..28818)
DNA (1656bp) protein (552aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KJE44414.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KJE44414.1};; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwel
fadD1; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486T3_COLP3
BD02T64_scaffold_1015_21
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29096..29938)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI00038087CF
Uncharacterized protein {ECO:0000313|EMBL:KJE44415.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
lipase
BD02T64_scaffold_1015_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30023..30709)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000371C6F6
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AAZ28843.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
BD02T64_scaffold_1015_23
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30791..31171)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE44416.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
BD02T64_scaffold_1015_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31282..32007)
DNA (726bp) protein (242aa)
Putative glycoprotease family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486T7_COLP3
Universal protein YeaZ {ECO:0000313|EMBL:KGJ91821.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
glycoprotease
BD02T64_scaffold_1015_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32110..34050)
DNA (1941bp) protein (647aa)
ATP-dependent helicase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XC2_COLP3
ATP-dependent helicase
ATP-dependent helicase {ECO:0000313|EMBL:AAZ26082.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
BD02T64_scaffold_1015_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34123..34449)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XC1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ93264.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1015_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34942..35811
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482X9_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ28607.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
Displaying 27 items

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