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BD02T64_scaffold_2376

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2376_1
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..115
DNA (114bp) protein (38aa)
tuf-1; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3S858_9RHOB
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacter
BD02T64_scaffold_2376_2
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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483..680
DNA (198bp) protein (66aa)
Protein translocase subunit SecE n=2 Tax=Sulfitobacter RepID=A3S873_9RHOB rbh
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sul
preprotein translocase-like protein
BD02T64_scaffold_2376_3
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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886..1419
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3S872_9RHOB rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobact
nusG; transcription antitermination protein NusG rbh
BD02T64_scaffold_2376_4

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1579..2004
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=2 Tax=Sulfitobacter RepID=A3S871_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN51682.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L11
BD02T64_scaffold_2376_5
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2006..2704
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=2 Tax=Sulfitobacter RepID=A3S870_9RHOB rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobact
50S ribosomal protein L1
BD02T64_scaffold_2376_6
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3103..3618
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DZJ4_9RHOB rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sul
rplJ; 50S ribosomal protein L10
BD02T64_scaffold_2376_7
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3694..4065
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=2 Tax=Sulfitobacter RepID=A3S868_9RHOB rbh
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfito
rplL; 50S ribosomal protein L7/L12
BD02T64_scaffold_2376_8
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4350..8486
DNA (4137bp) protein (1379aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta n=4 Tax=Rhodobacteraceae RepID=A3S867_9RHOB rbh
BD02T64_scaffold_2376_9
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8581..12828
DNA (4248bp) protein (1416aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta' n=2 Tax=Sulfitobacter RepID=A3S866_9RHOB rbh
BD02T64_scaffold_2376_10
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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13026..13874
DNA (849bp) protein (283aa)
Membrane protein, putative n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3S865_9RHOB rbh
Membrane protein {ECO:0000313|EMBL:KFC27985.1}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. CB20
hypothetical protein
BD02T64_scaffold_2376_11
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13871..14677)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3ST27_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC27986.1}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter s
hypothetical protein
BD02T64_scaffold_2376_12

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15007..15453
DNA (447bp) protein (149aa)
30S ribosomal protein S12 n=4 Tax=Alphaproteobacteria RepID=A3S863_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN51690.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rpsL; 30S ribosomal protein S12
BD02T64_scaffold_2376_13
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15630..16100
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=2 Tax=Sulfitobacter RepID=A3S861_9RHOB rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobact
rpsG; 30S ribosomal protein S7
BD02T64_scaffold_2376_14
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16184..18310
DNA (2127bp) protein (709aa)
Elongation factor G n=2 Tax=Sulfitobacter RepID=A3S859_9RHOB rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
fusA; elongation factor G rbh
BD02T64_scaffold_2376_15
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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18415..18531
DNA (117bp) protein (39aa)
Elongation factor Tu n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3ST21_9RHOB
tufA; elongation factor Tu (EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacter
Displaying 15 items

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