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BD02T64_scaffold_1279

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1279_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..266
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037CA03B
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
outer membrane protein assembly complex subunit YfgL
BD02T64_scaffold_1279_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

427..1911
DNA (1485bp) protein (495aa)
GTPase Der n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=DER_COLP3
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacte
engA; GTP-binding protein EngA
BD02T64_scaffold_1279_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2067..2750
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WC6_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27537.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1279_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2747..4081)
DNA (1335bp) protein (445aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WC8_COLP3
BD02T64_scaffold_1279_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4316..5788
DNA (1473bp) protein (491aa)
guaB; inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Colwellia piezophila RepID=UPI0003719F9E rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
BD02T64_scaffold_1279_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6042..7619
DNA (1578bp) protein (526aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase n=1 Tax=Colwellia piezophila RepID=UPI0003788852
BD02T64_scaffold_1279_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7880..8527
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KLZ0_SHEWM
Uncharacterized protein {ECO:0000313|EMBL:KGJ95478.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
BD02T64_scaffold_1279_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8529..8879
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003737DE9
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGJ90637.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
L-PSP family endoribonuclease
BD02T64_scaffold_1279_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9021..9734
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WD3_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ28662.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1279_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9792..11807
DNA (2016bp) protein (672aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Colwellia piezophila RepID=UPI00037A1506
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:KGJ88980.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
ATP-dependent DNA helicase RecQ
BD02T64_scaffold_1279_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11926..12252
DNA (327bp) protein (109aa)
signal peptide protein n=1 Tax=Colwellia piezophila RepID=UPI0003700E3E rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ94835.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
BD02T64_scaffold_1279_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12324..13193
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003628CE1
Uncharacterized protein {ECO:0000313|EMBL:KGJ94834.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1279_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13193..13987
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488B9_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ86928.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1279_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14098..14928
DNA (831bp) protein (277aa)
Membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WD7_COLP3
membrane protein
Membrane protein {ECO:0000313|EMBL:AAZ25760.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (str
BD02T64_scaffold_1279_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14914..15798)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WE2_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88994.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1279_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16170..17753)
DNA (1584bp) protein (528aa)
Heme-binding protein NirN n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WE3_COLP3
nirN; heme-binding protein NirN
Heme-binding protein NirN {ECO:0000313|EMBL:AAZ24674.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
BD02T64_scaffold_1279_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17801..18667)
DNA (867bp) protein (289aa)
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:KGJ95490.1}; EC=2.1.1.107 {ECO:0000313|EMBL:KGJ95490.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Co
cobA2; uroporphyrin-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WE4_COLP3
BD02T64_scaffold_1279_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18682..19902)
DNA (1221bp) protein (407aa)
Putative heme biosynthesis protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WE5_COLP3
Heme D1 biosynthesis, radical SAM protein NirJ {ECO:0000313|EMBL:KGJ95491.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
heme biosynthesis protein
BD02T64_scaffold_1279_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19963..20505)
DNA (543bp) protein (181aa)
Putative heme biosythesis protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WE6_COLP3
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:KGJ95492.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="
heme biosynthesis protein
BD02T64_scaffold_1279_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20480..20971)
DNA (492bp) protein (164aa)
Putative heme biosynthesis protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WE7_COLP3
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:KGJ95493.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="
heme biosynthesis protein
BD02T64_scaffold_1279_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20964..22106)
DNA (1143bp) protein (381aa)
Putative heme biosynthesis protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WE8_COLP3
heme biosynthesis protein
Putative heme biosynthesis protein {ECO:0000313|EMBL:AAZ26376.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
BD02T64_scaffold_1279_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22109..23344)
DNA (1236bp) protein (412aa)
NirF protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WE9_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ95495.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
nirF protein
BD02T64_scaffold_1279_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23358..23759)
DNA (402bp) protein (134aa)
C-type cytochrome c55x n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WF0_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ95496.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
nirC; c-type cytochrome c55x
BD02T64_scaffold_1279_24
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24122..26347
DNA (2226bp) protein (742aa)
Outer membrane hemin receptor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L0N3_9GAMM rbh
Outer membrane hemin receptor {ECO:0000313|EMBL:EED40725.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotr
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
BD02T64_scaffold_1279_25
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26504..27202
DNA (699bp) protein (233aa)
aspartate racemase n=1 Tax=Aliivibrio logei RepID=UPI00031C59F1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG36649.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea ps
BD02T64_scaffold_1279_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27247..27813)
DNA (567bp) protein (189aa)
Hemerythrin family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WF1_COLP3
hemerythrin family protein
Hemerythrin family protein {ECO:0000313|EMBL:AAZ28702.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryt
BD02T64_scaffold_1279_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28128..29756
DNA (1629bp) protein (543aa)
nirS; nitrite reductase (EC:1.7.2.1)
Nitrite reductase {ECO:0000313|EMBL:AAZ25602.1}; EC=1.7.2.1 {ECO:0000313|EMBL:AAZ25602.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwell
Nitrite reductase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WF2_COLP3
BD02T64_scaffold_1279_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30121..30675
DNA (555bp) protein (185aa)
Denitrification system component NirT/cytochrome c552 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WF3_COLP3
nirTB; denitrification system component NirT/cytochrome c552
Denitrification system component NirT/cytochrome c552 {ECO:0000313|EMBL:AAZ25206.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" s
Displaying 28 items

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