ggKbase home page

BD02T64_scaffold_2193

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2193_1
unknown

Not on your lists

3..80
DNA (78bp) protein (26aa)

This feature has no annotations

BD02T64_scaffold_2193_2
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

92..760
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U000_9FLAO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ42218.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_2193_3
Nonlabens ulvanivorans, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1136..2494
DNA (1359bp) protein (453aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ92518.1}; TaxID=906888 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens ulvanivorans.;
BD02T64_scaffold_2193_4
unknown

Not on your lists

2537..3025
DNA (489bp) protein (163aa)

This feature has no annotations

BD02T64_scaffold_2193_5
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3090..4166)
DNA (1077bp) protein (359aa)
peptide chain release factor 1 n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00036469CA
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavob
BD02T64_scaffold_2193_6
unknown

Not on your lists

4260..4544
DNA (285bp) protein (95aa)

This feature has no annotations

BD02T64_scaffold_2193_7
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4541..5197
DNA (657bp) protein (219aa)
ABC transporter family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EFY7_9FLAO rbh
ABC transporter family protein {ECO:0000313|EMBL:EGV42646.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentin
ABC transporter ATP-binding protein
BD02T64_scaffold_2193_8
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5194..5622
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2TZZ3_9FLAO
hypothetical protein Tax=CG_Flavo_02
hypothetical protein
BD02T64_scaffold_2193_9
unknown

Not on your lists

5698..6156
DNA (459bp) protein (153aa)

This feature has no annotations

BD02T64_scaffold_2193_10
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6203..7090)
DNA (888bp) protein (296aa)
Two-component system response regulator n=1 Tax=Kordia algicida OT-1 RepID=A9DRB0_9FLAO rbh
Transcriptional regulator {ECO:0000313|EMBL:EZH73513.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica
two-component system response regulator
BD02T64_scaffold_2193_11
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7190..7753
DNA (564bp) protein (188aa)
YCE I like family protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UMD3_9FLAO
YCE I like family protein {ECO:0000313|EMBL:EDP70822.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
rhodanese-like domain protein
BD02T64_scaffold_2193_12
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7758..8336
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DRA5_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGL62589.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
BD02T64_scaffold_2193_13
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8393..9571)
DNA (1179bp) protein (393aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:KGL58665.1}; EC=6.3.3.1 {ECO:0000313|EMBL:KGL58665.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriale
purM1; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Polaribacter sp. MED152 RepID=A2TZY6_9FLAO rbh
BD02T64_scaffold_2193_14
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9632..10117)
DNA (486bp) protein (162aa)
GCN5-related N-acetyltransferase n=2 Tax=Flavobacterium RepID=A5FFC6_FLAJ1 rbh
phosphinothricin acetyltransferase
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:AKD02089.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;
BD02T64_scaffold_2193_15
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10214..12397)
DNA (2184bp) protein (728aa)
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Kordia algicida OT-1 RepID=A9E8R2_9FLAO
Glutamine synthetase {ECO:0000313|EMBL:EDP94796.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
BD02T64_scaffold_2193_16
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12571..13593
DNA (1023bp) protein (341aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
glutamine synthetase n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI0003820DA6
glutamine synthetase type II, eukaryotic
BD02T64_scaffold_2193_17
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13652..14587)
DNA (936bp) protein (312aa)
CaCA family Na+/Ca+ antiporter n=1 Tax=Imtechella halotolerans K1 RepID=I0WBB8_9FLAO
Sodium/calcium exchanger {ECO:0000313|EMBL:KGL58674.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. He
CaCA family Na+/Ca+ antiporter
BD02T64_scaffold_2193_18
unknown

Not on your lists

14714..15106
DNA (393bp) protein (131aa)

This feature has no annotations

BD02T64_scaffold_2193_19
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15437..15667
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00036F70D2
Uncharacterized protein {ECO:0000313|EMBL:EAR11527.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
hypothetical protein
BD02T64_scaffold_2193_20
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16148..16420)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003651560 rbh
hypothetical protein Tax=CG_Flavo_02
hypothetical protein
BD02T64_scaffold_2193_21
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16422..16706)
DNA (285bp) protein (95aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Polaribacter sp. MED152 RepID=A2U3V0_9FLAO
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:EAQ40676.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" sourc
BD02T64_scaffold_2193_22
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16717..17553)
DNA (837bp) protein (279aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
ribosomal protein L11 methyltransferase n=1 Tax=Polaribacter franzmannii RepID=UPI00036D5163
prmA; ribosomal protein L11 methyltransferase
BD02T64_scaffold_2193_23
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17557..18315)
DNA (759bp) protein (253aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UHL9_9FLAO
triosephosphate isomerase
BD02T64_scaffold_2193_24
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18384..18872)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003631AD8
Redoxin {ECO:0000313|EMBL:KGL58682.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
redoxin
BD02T64_scaffold_2193_25
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18977..19816
DNA (840bp) protein (280aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1250005 species="Bact
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GJ82_LACS5
BD02T64_scaffold_2193_26
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20057..21673)
DNA (1617bp) protein (539aa)
Putative outer membrane protein probably involved in nutrient binding protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RBA2_CELLC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWH12608.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojens
BD02T64_scaffold_2193_27
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21694..24825)
DNA (3132bp) protein (1044aa)
TonB-dependent receptor plug n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RBA3_CELLC
membrane protein
TonB-dependent receptor plug {ECO:0000313|EMBL:ADY28505.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lyt
Displaying 27 items

View Taxonomy