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BD02T64_scaffold_1826

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1826_1

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2..835
DNA (834bp) protein (278aa)
HD-GYP domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y8H3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKK84452.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HD domain-containing protein
BD02T64_scaffold_1826_2
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1023..1517)
DNA (495bp) protein (165aa)
Transcription elongation factor GreB n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4L428_SIMAS rbh
transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteob
BD02T64_scaffold_1826_3
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1559..3496)
DNA (1938bp) protein (646aa)
peptidase S9, prolyl oligopeptidase active site region (EC:3.4.19.1)
Peptidase S9, prolyl oligopeptidase active site region {ECO:0000313|EMBL:ABA57660.1}; EC=3.4.19.1 {ECO:0000313|EMBL:ABA57660.1};; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; C
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034AAC1D rbh
BD02T64_scaffold_1826_4

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comp(3500..3823)
DNA (324bp) protein (108aa)
Translation initiation factor eIF-1 n=1 Tax=Cellvibrio sp. BR RepID=I3I9Y2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKK76892.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translation initiation factor 1 (eIF-1/SUI1)
BD02T64_scaffold_1826_5
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3886..4881)
DNA (996bp) protein (332aa)
Zinc-containing alcohol dehydrogenase superfamily {ECO:0000313|EMBL:ABC21857.1}; EC=1.6.5.5 {ECO:0000313|EMBL:ABC21857.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodosp
Zinc-containing alcohol dehydrogenase superfamily protein n=2 Tax=Rhodospirillum rubrum RepID=G2TEA1_RHORU rbh
zinc-containing alcohol dehydrogenase superfamily protein
BD02T64_scaffold_1826_6
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4899..6107)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FU67_SHESH
Gamma-aminobutyrate permease-related permease {ECO:0000313|EMBL:AHE67721.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="
hypothetical protein
BD02T64_scaffold_1826_7
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6275..7123
DNA (849bp) protein (283aa)
Ion transport protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21HJ0_SACD2 rbh
Ion transport protein rbh
Ion transport protein {ECO:0000313|EMBL:ABD81839.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus de
BD02T64_scaffold_1826_8
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7127..8602
DNA (1476bp) protein (492aa)
Cardiolipin synthase A {ECO:0000256|HAMAP-Rule:MF_00190}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_00190};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_00190};; Flags: Precursor;; TaxID=1206767 species=
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FGG2_9DELT rbh
cls; cardiolipin synthetase
BD02T64_scaffold_1826_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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8728..10515
DNA (1788bp) protein (596aa)
glutamate synthase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B4D063 rbh
Glutamate synthase {ECO:0000313|EMBL:KJS09706.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
BD02T64_scaffold_1826_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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10572..12437
DNA (1866bp) protein (622aa)
2-ketoglutarate: nadp oxidoreductase, alpha subunit n=1 Tax=gamma proteobacterium HdN1 RepID=E1VI96_9GAMM rbh
Ferredoxin oxidoreductase {ECO:0000313|EMBL:KJS09705.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
korA; 2-ketoglutarate: nadp oxidoreductase, alpha subunit rbh
BD02T64_scaffold_1826_11
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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12434..13486
DNA (1053bp) protein (351aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=gamma proteobacterium BDW918 RepID=I2JKT4_9GAMM rbh
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:KJS09704.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c
korB; 2-ketoglutarate: NADP oxidoreductase subunit beta
BD02T64_scaffold_1826_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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13513..13716
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QPD1_SPILD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39439.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
BD02T64_scaffold_1826_13
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

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13833..14144
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KD65_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGG99688.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
BD02T64_scaffold_1826_14
unknown

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14424..14735
DNA (312bp) protein (104aa)

This feature has no annotations

BD02T64_scaffold_1826_15
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14807..16228
DNA (1422bp) protein (474aa)
Co/Zn/Cd efflux system component n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8G051_SHESH rbh
Co/Zn/Cd efflux system protein rbh
Co/Zn/Cd efflux system component {ECO:0000313|EMBL:ABV38474.1}; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" s
BD02T64_scaffold_1826_16

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16225..17469
DNA (1245bp) protein (415aa)
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XFT0_METNJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKK51597.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Co/Zn/Cd efflux system membrane fusion protein rbh
BD02T64_scaffold_1826_17
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17478..20615
DNA (3138bp) protein (1046aa)
Cobalt-zinc-cadmium resistance protein CzcA (Cation efflux system protein CzcA) n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8G049_SHESH rbh
cobalt-zinc-cadmium resistance protein CzcA (cation efflux system protein CzcA) rbh
Cobalt-zinc-cadmium resistance protein CzcA (Cation efflux system protein CzcA) {ECO:0000313|EMBL:ABV38472.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; She
BD02T64_scaffold_1826_18
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20871..21146)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B62D86 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD66062.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
transcriptional repressor protein
BD02T64_scaffold_1826_19
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21219..22148
DNA (930bp) protein (310aa)
Probable metal transporter n=3 Tax=Pseudomonas RepID=B7XGW0_PSEPU rbh
putative cobalt/cadmium/zinc transporter
Probable metal transporter {ECO:0000313|EMBL:BAH10118.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida
BD02T64_scaffold_1826_20
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22848..23240)
DNA (393bp) protein (131aa)
LysR family transcriptional regulator n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FM36_9ALTE
LysR family transcriptional regulator {ECO:0000313|EMBL:KKD61699.1}; TaxID=1581149 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia sp.
LysR family transcriptional regulator
Displaying 20 items

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