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BD02T64_scaffold_3113

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3113_1
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..480
DNA (480bp) protein (160aa)
Lipopolysaccharide core heptose(I) kinase {ECO:0000256|PIRNR:PIRNR037318}; EC=2.7.1.- {ECO:0000256|PIRNR:PIRNR037318};; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichal
hypothetical protein n=1 Tax=Cycloclasticus pugetii RepID=UPI0003745E8F
waaP; Lipopolysaccharide kinase RfaP
BD02T64_scaffold_3113_2
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(477..1214)
DNA (738bp) protein (246aa)
Lipopolysaccharide core biosynthesis protein, putative n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5T665_9GAMM
Lipopolysaccharide core biosynthesis protein, putative
Lipopolysaccharide core biosynthesis protein, putative {ECO:0000313|EMBL:AGS39029.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cyclocla
BD02T64_scaffold_3113_3
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1320..2099
DNA (780bp) protein (260aa)
Lipopolysaccharide kinase (Kdo/WaaP) family n=2 Tax=Cycloclasticus RepID=K0C5U2_CYCSP
Lipopolysaccharide kinase (Kdo/WaaP) family
Lipopolysaccharide kinase (Kdo/WaaP) family {ECO:0000313|EMBL:AFT67800.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" so
BD02T64_scaffold_3113_4
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2229..3953
DNA (1725bp) protein (575aa)
Carbamoyltransferase family n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C3B5_CYCSP rbh
Carbamoyltransferase family
Carbamoyltransferase family {ECO:0000313|EMBL:AFT67799.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclast
BD02T64_scaffold_3113_5
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4006..4662)
DNA (657bp) protein (219aa)
O-antigen polymerase family protein/toluene tolerance protein n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C5M3_CYCSP
O-antigen polymerase family protein/toluene tolerance protein
O-antigen polymerase family protein/toluene tolerance protein {ECO:0000313|EMBL:AFT67798.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cy
BD02T64_scaffold_3113_6
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4662..4868)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Cycloclasticus pugetii RepID=UPI00037B3E4E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT67797.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus
BD02T64_scaffold_3113_7
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4924..5460
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Cycloclasticus sp. PY97M RepID=S2VAK2_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS39034.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_3113_8
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5481..6188)
DNA (708bp) protein (236aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TVA7_9GAMM rbh
Dimethyladenosine transferase (rRNA methylation)
BD02T64_scaffold_3113_9
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6271..7248)
DNA (978bp) protein (326aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Cycloclasticus pugetii RepID=UPI00037B2728 rbh
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
BD02T64_scaffold_3113_10
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7280..8578)
DNA (1299bp) protein (433aa)
Chaperone SurA n=3 Tax=Cycloclasticus RepID=S5TDY8_9GAMM rbh
Parvulin-like peptidyl-prolyl isomerase
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
BD02T64_scaffold_3113_11
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8684..11110)
DNA (2427bp) protein (809aa)
LPS-assembly protein LptD n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TVJ4_9GAMM rbh
Organic solvent tolerance protein OstA
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cy
BD02T64_scaffold_3113_12
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11494..12516
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Cycloclasticus pugetii RepID=UPI00037A621F rbh
putative phosphotransferase, Ser/Thr protein kinase
Putative phosphotransferase, Ser/Thr protein kinase {ECO:0000313|EMBL:AGS39039.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasti
BD02T64_scaffold_3113_13
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12513..13178
DNA (666bp) protein (222aa)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (EIF-2Bgamma/eIF-2Bepsilon) n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TVB0_9GAMM rbh
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (EIF-2Bgamma/eIF-2Bepsilon) {ECO:0000313|EMBL:AGS390
BD02T64_scaffold_3113_14
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13215..14189)
DNA (975bp) protein (325aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=3 Tax=Cycloclasticus RepID=K0C3A9_CYCSP rbh
Lipoate synthase
BD02T64_scaffold_3113_15
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14194..14634)
DNA (441bp) protein (147aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=2 Tax=Cycloclasticus RepID=S5TDZ2_9GAMM
lipoate-protein ligase B
Displaying 15 items

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