ggKbase home page

BD02T64_scaffold_3453

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3453_1
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae;
hypothetical protein n=1 Tax=Cycloclasticus pugetii RepID=UPI0003648C80
ATP-binding region, ATPase-like:Histidine kinase A
BD02T64_scaffold_3453_2
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232..1404)
DNA (1173bp) protein (391aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C4W0_CYCSP
Sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:AFT66751.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclast
BD02T64_scaffold_3453_3
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1392..1646)
DNA (255bp) protein (85aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TYE6_9GAMM
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGS40195.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotric
BD02T64_scaffold_3453_4
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1828..3105
DNA (1278bp) protein (426aa)
Putative Mg2+ and Co2+ transporter CorB n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5T8X3_9GAMM rbh
Putative Mg2+ and Co2+ transporter CorB
Putative Mg2+ and Co2+ transporter CorB {ECO:0000313|EMBL:AGS40196.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" sourc
BD02T64_scaffold_3453_5
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3147..3773
DNA (627bp) protein (209aa)
FHA domain-containing protein n=1 Tax=Cycloclasticus sp. PY97M RepID=S2V117_9GAMM rbh
hypothetical protein
FHA domain containing protein {ECO:0000313|EMBL:AFT66749.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclocla
BD02T64_scaffold_3453_6
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3783..4178
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003765926
type IV pilus assembly PilZ
Tax=BJP_IG2158_Methylococcales_50_91
BD02T64_scaffold_3453_7
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4175..5539)
DNA (1365bp) protein (455aa)
DNA repair protein radA n=2 Tax=Cycloclasticus RepID=K0C2L3_CYCSP rbh
radA; DNA repair protein radA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclastic
BD02T64_scaffold_3453_8
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5529..6623)
DNA (1095bp) protein (365aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1198232 species="Bacteria; Proteo
alanine racemase n=1 Tax=Cycloclasticus pugetii RepID=UPI0003711D04 rbh
Alanine racemase rbh
BD02T64_scaffold_3453_9
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..8061)
DNA (1398bp) protein (466aa)
Replicative helicase dnaB2 n=3 Tax=Cycloclasticus RepID=K0C4V4_CYCSP rbh
dnaB; Replicative helicase dnaB2
Replicative helicase dnaB2 {ECO:0000313|EMBL:AFT66746.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasti
BD02T64_scaffold_3453_10
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8177..8626)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=3 Tax=Cycloclasticus RepID=K0C2N2_CYCSP rbh
Ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclocla
BD02T64_scaffold_3453_11
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8669..9574)
DNA (906bp) protein (302aa)
Uncharacterized protein n=3 Tax=Cycloclasticus RepID=S5TH43_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS40202.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_3453_12
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9614..9850)
DNA (237bp) protein (79aa)
30S ribosomal protein S18 n=3 Tax=Cycloclasticus RepID=K0C2K7_CYCSP
Ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclocl
BD02T64_scaffold_3453_13
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9882..10310)
DNA (429bp) protein (143aa)
30S ribosomal protein S6 n=2 Tax=Cycloclasticus RepID=S5T9B3_9GAMM rbh
Ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cyc
BD02T64_scaffold_3453_14
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10540..11058)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SW60_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE22975.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
BD02T64_scaffold_3453_15
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11110..11859)
DNA (750bp) protein (250aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Cycloclasticus RepID=K0C4U7_CYCSP rbh
RNA methyltransferase, TrmH family
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:AGS40205.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cy
BD02T64_scaffold_3453_16
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11859..14054)
DNA (2196bp) protein (732aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1198232 species="Bacteria; Proteobacteria; Gam
exoribonuclease R n=1 Tax=Cycloclasticus pugetii RepID=UPI000364FC6A rbh
Exoribonuclease R
BD02T64_scaffold_3453_17
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14557..14682)
DNA (126bp) protein (42aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TH46_9GAMM
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
UDP-N-acetyl-D-mannosaminuronate dehydrogenase {ECO:0000313|EMBL:AGS40207.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;
Displaying 17 items

View Taxonomy