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BD02T64_scaffold_871

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_871_1
uncultured gamma proteobacterium, Gammaproteobacteria, Proteobacteria, Bacteria

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429..1112
DNA (684bp) protein (228aa)
Methane monooxygenase, C subunit n=1 Tax=uncultured gamma proteobacterium RepID=H5SGT8_9GAMM
Methane monooxygenase, C subunit {ECO:0000313|EMBL:BAL55374.1}; TaxID=86473 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium.;"
ammonia monooxygenase
BD02T64_scaffold_871_2
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1182..1658)
DNA (477bp) protein (159aa)
SsrA-binding protein n=3 Tax=Cycloclasticus RepID=K0C719_CYCSP rbh
smpB; ssrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cyclocla
BD02T64_scaffold_871_3
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1771..3123
DNA (1353bp) protein (451aa)
Transporter n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5T717_9GAMM rbh
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zancles
BD02T64_scaffold_871_4
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3128..3559
DNA (432bp) protein (144aa)
Oligoketide cyclase/lipid transport protein n=3 Tax=Cycloclasticus RepID=S5TW13_9GAMM rbh
Oligoketide cyclase/lipid transport protein
Oligoketide cyclase/lipid transport protein {ECO:0000313|EMBL:AGS39325.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" s
BD02T64_scaffold_871_5
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3552..3860
DNA (309bp) protein (103aa)
UPF0125 protein Q91_1472 n=3 Tax=Cycloclasticus RepID=K0C2E1_CYCSP rbh
hypothetical protein
UPF0125 protein Q91_1472 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclas
BD02T64_scaffold_871_6
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4101..5654
DNA (1554bp) protein (518aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TEV0_9GAMM rbh
Isopropylmalate/homocitrate/citramalate synthase
BD02T64_scaffold_871_7
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5818..7119)
DNA (1302bp) protein (434aa)
Coenzyme F420-dependent N5, N10-methylene tetrahydromethanopterin reductase-related flavin-dependent oxidoreductase n=2 Tax=Cycloclasticus RepID=S5TY48_9GAMM rbh
Coenzyme F420-dependent N5, N10-methylene tetrahydromethanopterin reductase-related flavin-dependent oxidoreductase
Coenzyme F420-dependent N5, N10-methylene tetrahydromethanopterin reductase-related flavin-dependent oxidoreductase {ECO:0000313|EMBL:AGS39928.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gamm
BD02T64_scaffold_871_8
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7430..7876)
DNA (447bp) protein (149aa)
Thioesterase superfamily protein n=3 Tax=Cycloclasticus RepID=K0C2D3_CYCSP rbh
Uncharacterized protein, possibly involved in aromatic compounds catabolism
Thioesterase superfamily protein {ECO:0000313|EMBL:AFT67504.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclo
BD02T64_scaffold_871_9
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7876..8304)
DNA (429bp) protein (143aa)
Thioesterase family protein n=2 Tax=Cycloclasticus RepID=K0C4P1_CYCSP rbh
Thioesterase family protein
Thioesterase family protein {ECO:0000313|EMBL:AFT67503.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclast
BD02T64_scaffold_871_10
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8306..8713)
DNA (408bp) protein (136aa)
Small protein A (TmRNA-binding) n=3 Tax=Cycloclasticus RepID=S5TEV5_9GAMM
Small protein A (tmRNA-binding)
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiace
BD02T64_scaffold_871_11
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8882..9292
DNA (411bp) protein (137aa)
Ferric uptake transcription regulator (Ferric uptake regulator) n=3 Tax=Cycloclasticus RepID=K0C768_CYCSP rbh
Fe2+/Zn2+ uptake regulation protein
Ferric uptake transcription regulator (Ferric uptake regulator) {ECO:0000313|EMBL:AFT67501.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae;
BD02T64_scaffold_871_12
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9285..10955)
DNA (1671bp) protein (557aa)
DNA repair protein RecN n=2 Tax=Cycloclasticus RepID=K0C4K9_CYCSP rbh
recN; DNA repair ATPase RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pi
BD02T64_scaffold_871_13
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10962..11846)
DNA (885bp) protein (295aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=3 Tax=Cycloclasticus RepID=K0C2C8_CYCSP rbh
NAD(+)/NADH kinase
BD02T64_scaffold_871_14
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11980..13017
DNA (1038bp) protein (346aa)
HrcA family transcriptional regulator n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037E389C rbh
heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" s
BD02T64_scaffold_871_15
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13111..13734
DNA (624bp) protein (208aa)
Protein GrpE n=3 Tax=Cycloclasticus RepID=K0C707_CYCSP rbh
Molecular chaperone GrpE (heat shock protein)
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; T
BD02T64_scaffold_871_16
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13802..15730
DNA (1929bp) protein (643aa)
Chaperone protein DnaK n=3 Tax=Cycloclasticus RepID=K0C757_CYCSP rbh
dnaK; chaperone protein dnaK rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
BD02T64_scaffold_871_17
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15834..16964
DNA (1131bp) protein (377aa)
Chaperone protein DnaJ n=3 Tax=Cycloclasticus RepID=K0C4K5_CYCSP rbh
DnaJ-class molecular chaperone with C-terminal Zn finger domain
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cyclo
BD02T64_scaffold_871_18
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17077..17883
DNA (807bp) protein (269aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Cycloclasticus RepID=K0C2C5_CYCSP rbh
Dihydrodipicolinate reductase
BD02T64_scaffold_871_19
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17985..19373
DNA (1389bp) protein (463aa)
Ferredoxin:NADH oxidoreductase or NADH oxidase n=2 Tax=Cycloclasticus RepID=K0C4N2_CYCSP rbh
putative NAD(FAD)-dependent dehydrogenase
Putative NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:AGS39340.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" sou
BD02T64_scaffold_871_20
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19514..20650
DNA (1137bp) protein (379aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl phosphate synthase small subunit n=1 Tax=Cycloclasticus pugetii RepID=UPI00037234D4 rbh
Carbamoylphosphate synthase small subunit
BD02T64_scaffold_871_21
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20660..23881
DNA (3222bp) protein (1074aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Carbamoyl-phosphate synthase large chain n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UIR0_9GAMM rbh
carB; Carbamoyl-phosphate synthase, large subunit
BD02T64_scaffold_871_22
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23898..24374
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=3 Tax=Cycloclasticus RepID=K0C4K3_CYCSP rbh
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=385025 species="Bacteria
BD02T64_scaffold_871_23
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24365..24652)
DNA (288bp) protein (96aa)
23S rRNA methyltransferase J n=3 Tax=Cycloclasticus RepID=K0C2C0_CYCSP rbh
putative RNA-binding protein containing KH domain
Putative RNA-binding protein containing KH domain {ECO:0000313|EMBL:AGS39344.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticu
BD02T64_scaffold_871_24
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24729..25355
DNA (627bp) protein (209aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
23S rRNA methyltransferase n=1 Tax=Cycloclasticus pugetii RepID=UPI00036A70E8 rbh
23S rRNA methylase
BD02T64_scaffold_871_25
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25454..27376
DNA (1923bp) protein (641aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotric
ATP-dependent zinc metalloprotease FtsH n=3 Tax=Cycloclasticus RepID=K0C6Z9_CYCSP rbh
ATP-dependent metalloprotease FtsH
BD02T64_scaffold_871_26
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27432..28211
DNA (780bp) protein (260aa)
Dihydropteroate synthase n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C742_CYCSP rbh
folP; dihydropteroate synthase
Dihydropteroate synthase {ECO:0000313|EMBL:AFT67486.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_871_27
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28219..29559
DNA (1341bp) protein (447aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1198232 species="Bacter
Phosphoglucosamine mutase n=2 Tax=Cycloclasticus RepID=S5TWI1_9GAMM rbh
Phosphomannomutase
BD02T64_scaffold_871_28
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29654..30400
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C2B5_CYCSP rbh
triosephosphate isomerase
BD02T64_scaffold_871_29
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30412..30807
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Cycloclasticus RepID=K0C4M6_CYCSP rbh
Preprotein translocase subunit SecG
Uncharacterized protein {ECO:0000313|EMBL:AFT67483.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus
BD02T64_scaffold_871_30
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30926..31237
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Cycloclasticus sp. PY97M RepID=S2VCP1_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS39351.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
Displaying items 1-30 of 37 in total

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