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BD02T64_scaffold_2049

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2049_1
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..817)
DNA (816bp) protein (272aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
exodeoxyribonuclease VII large subunit n=1 Tax=Cycloclasticus pugetii RepID=UPI0003672516
Exonuclease VII, large subunit
BD02T64_scaffold_2049_2
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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868..2370
DNA (1503bp) protein (501aa)
Inosine-5'-monophosphate dehydrogenase n=3 Tax=Cycloclasticus RepID=K0C4Q8_CYCSP rbh
guaB; inosine-5'-monophosphate dehydrogenase
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:00
BD02T64_scaffold_2049_3
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2386..3975
DNA (1590bp) protein (530aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Cycloclasticus RepID=K0C291_CYCSP rbh
guaA; bifunctional GMP synthase/glutamine amidotransferase protein
BD02T64_scaffold_2049_4
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4003..4431
DNA (429bp) protein (143aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales
CMP/dCMP deaminase zinc-binding protein n=3 Tax=Cycloclasticus RepID=K0C298_CYCSP rbh
tadA; CMP/dCMP deaminase zinc-binding protein
BD02T64_scaffold_2049_5
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4539..5372
DNA (834bp) protein (278aa)
Alpha/beta hydrolase fold-1 domain-containing protein n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UIF9_9GAMM rbh
alpha/beta hydrolase fold-1 domain-containing protein
Alpha/beta hydrolase fold-1 domain-containing protein {ECO:0000313|EMBL:AFT66659.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclast
BD02T64_scaffold_2049_6
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5367..6788)
DNA (1422bp) protein (474aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016};; Murein lyase F {ECO:0000256|HAMAP-Rule:MF_02016}; Flags: Precursor;; T
Membrane-bound lytic murein transglycosylase F n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C2B0_CYCSP rbh
lytic transglycosylase
BD02T64_scaffold_2049_7
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6922..7815)
DNA (894bp) protein (298aa)
Ribosome biogenesis GTPase A n=2 Tax=Cycloclasticus RepID=K0C736_CYCSP
rbgA, ylqF; 50S ribosomal subunit maturation GTPase RbgA
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclocl
BD02T64_scaffold_2049_8
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7888..8097)
DNA (210bp) protein (70aa)
Protein SlyX homolog n=3 Tax=Cycloclasticus RepID=K0C7B0_CYCSP rbh
hypothetical protein
Protein SlyX homolog {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclastic
BD02T64_scaffold_2049_9
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8101..9879)
DNA (1779bp) protein (593aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1198232 specie
RNA helicase n=1 Tax=Cycloclasticus pugetii RepID=UPI00037FE2AB rbh
Superfamily II DNA and RNA helicase
BD02T64_scaffold_2049_10
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10117..10710
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5T6B1_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS39301.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_2049_11
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10815..11885)
DNA (1071bp) protein (357aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:00002
4-hydroxy-2-oxovalerate aldolase n=2 Tax=Cycloclasticus RepID=K0C4R8_CYCSP rbh
lapG; 4-hydroxy-2-oxovalerate aldolase 1
BD02T64_scaffold_2049_12
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11885..12799)
DNA (915bp) protein (305aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [
Acetaldehyde dehydrogenase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TWE9_9GAMM rbh
Acetaldehyde dehydrogenase (acetylating)
BD02T64_scaffold_2049_13
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13372..14796
DNA (1425bp) protein (475aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2B0_NITHN rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:GAO35373.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulf
Fis family transcriptional regulator
BD02T64_scaffold_2049_14
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(14862..15629)
DNA (768bp) protein (256aa)
Thiol:disulfide interchange protein DsbA n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDA7_9BACT rbh
DSBA oxidoreductase Tax=RBG_16_Nitrospirae_43_11_curated
DSBA oxidoreductase
BD02T64_scaffold_2049_15
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16002..18317
DNA (2316bp) protein (772aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B951_9PSED rbh
Putative internalin {ECO:0000313|EMBL:KEA62102.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium s
hypothetical protein
BD02T64_scaffold_2049_16
unknown

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18511..18873
DNA (363bp) protein (121aa)

This feature has no annotations

BD02T64_scaffold_2049_17
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19031..21427)
DNA (2397bp) protein (799aa)
Peptidase M11 gametolysin n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LCL8_TOLAT rbh
Peptidase M11 gametolysin
Peptidase M11 gametolysin {ECO:0000313|EMBL:ACQ92582.1}; Flags: Precursor;; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tol
BD02T64_scaffold_2049_18
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22324..23316
DNA (993bp) protein (331aa)
Sensory box protein n=1 Tax=Yersinia bercovieri ATCC 43970 RepID=C4S5Z3_YERBE rbh
yedQ; Cellulose synthesis regulatory protein
Cellulose synthesis regulatory protein {ECO:0000313|EMBL:AHM75015.1}; TaxID=1443113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Y
BD02T64_scaffold_2049_19
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23523..24650)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003716D28 rbh
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABK45028.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magn
BD02T64_scaffold_2049_20
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24800..25330)
DNA (531bp) protein (177aa)
Response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain) n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AQ4_POLSJ
PAS domain S-box-containing protein {ECO:0000313|EMBL:KHF24951.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.
response regulator receiver/diguanylate phosphodiesterase
BD02T64_scaffold_2049_21
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25339..26304)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037B174C
PAS domain S-box-containing protein {ECO:0000313|EMBL:KHF24951.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.
response regulator receiver modulated diguanylate phosphodiesterase
Displaying 21 items

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