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BD02T64_scaffold_2083

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2083_1
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(86..1279)
DNA (1194bp) protein (398aa)
CoA transferase, CAIB/BAIF family protein n=3 Tax=Cycloclasticus RepID=K0C6E1_CYCSP rbh
putative acyl-CoA transferases/carnitine dehydratase
Putative acyl-CoA transferases/carnitine dehydratase {ECO:0000313|EMBL:AGS39572.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclast
BD02T64_scaffold_2083_2
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1280..2431)
DNA (1152bp) protein (384aa)
Acetyl-CoA acetyltransferase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TX47_9GAMM rbh
Acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGS39573.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclocla
BD02T64_scaffold_2083_3
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2435..2833)
DNA (399bp) protein (133aa)
Nucleic-acid-binding protein containing a Zn-ribbon n=3 Tax=Cycloclasticus RepID=K0C1N6_CYCSP rbh
putative nucleic-acid-binding protein containing a Zn-ribbon
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:AGS39574.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cy
BD02T64_scaffold_2083_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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2905..4119
DNA (1215bp) protein (405aa)
NADH:flavin oxidoreductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXZ8_9RHIZ
NADH:flavin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
NADH:flavin oxidoreductase
BD02T64_scaffold_2083_5
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4130..4582
DNA (453bp) protein (151aa)
Thioesterase superfamily protein n=3 Tax=Cycloclasticus RepID=K0C3Z3_CYCSP rbh
Thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:AFT67218.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclo
BD02T64_scaffold_2083_6
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4671..7241)
DNA (2571bp) protein (857aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=385025 species="Bacteria; Proteobacteria; Gam
Ribonuclease E n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C6C8_CYCSP rbh
rne; ribonuclease E
BD02T64_scaffold_2083_7
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7739..8677
DNA (939bp) protein (313aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsi
Pseudouridine synthase n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UFS0_9GAMM rbh
ribosomal large subunit pseudouridine synthase C
BD02T64_scaffold_2083_8
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8674..9315
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase, subfamily IA n=2 Tax=Cycloclasticus RepID=S5TX53_9GAMM rbh
HAD-superfamily hydrolase, subfamily IA
HAD-superfamily hydrolase, subfamily IA {ECO:0000313|EMBL:AGS39578.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" sourc
BD02T64_scaffold_2083_9
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9576..10547
DNA (972bp) protein (324aa)
Protease transmembrane protein n=2 Tax=Cycloclasticus RepID=K0C1M9_CYCSP rbh
Periplasmic serine proteases (ClpP class)
Protease transmembrane protein {ECO:0000313|EMBL:AFT67214.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclocl
BD02T64_scaffold_2083_10
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10613..10906
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TWN1_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS39580.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_2083_11
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10931..11611
DNA (681bp) protein (227aa)
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein n=3 Tax=Cycloclasticus RepID=K0C6C2_CYCSP rbh
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein {ECO:0000313|EMBL:AFT67212.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobac
BD02T64_scaffold_2083_12
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11629..12987
DNA (1359bp) protein (453aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae
Signal transduction histidine kinase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TFH2_9GAMM rbh
Signal transduction histidine kinase
BD02T64_scaffold_2083_13
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13253..14074)
DNA (822bp) protein (274aa)
NolW-like protein n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UDR5_9GAMM rbh
NolW-like protein
NolW-like protein {ECO:0000313|EMBL:AFT67210.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus sp. (
BD02T64_scaffold_2083_14
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14071..14589)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Cycloclasticus pugetii RepID=UPI0003720AC7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS39584.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_2083_15
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14806..16185)
DNA (1380bp) protein (460aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=2 Tax=Cycloclasticus RepID=K0C3X6_CYCSP rbh
adenylosuccinate lyase
BD02T64_scaffold_2083_16
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16202..17293)
DNA (1092bp) protein (364aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Cycloclasticus RepID=K0C6B8_CYCSP rbh
mnmA; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
BD02T64_scaffold_2083_17
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17315..17764)
DNA (450bp) protein (150aa)
Nudix-like NDP and NTP phosphohydrolase YmfB n=3 Tax=Cycloclasticus RepID=K0C6B6_CYCSP rbh
nudix-like NDP and NTP phosphohydrolase YmfB
NTP pyrophosphohydrolase including oxidative damage repair enzyme {ECO:0000313|EMBL:AGS39587.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiacea
BD02T64_scaffold_2083_18
unknown

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17920..18627
DNA (708bp) protein (236aa)

This feature has no annotations

BD02T64_scaffold_2083_19

Not on your lists

18673..19140
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism RepID=A5CFX2_9ZZZZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CAM58130.1}; TaxID=415540 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism.;"
BD02T64_scaffold_2083_20
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19202..20383
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Cycloclasticus pugetii RepID=UPI00037328DE
Permeases of the major facilitator superfamily
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:AGS38455.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;
BD02T64_scaffold_2083_21
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20695..21114)
DNA (420bp) protein (140aa)
LysR family transcriptional regulator n=1 Tax=Cycloclasticus pugetii RepID=UPI00036A6C7B
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFT67205.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="
Displaying 21 items

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