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BD02T64_scaffold_5241

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_5241_1
Dokdonia sp. 4H-3-7-5, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..84)
DNA (84bp) protein (28aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=983548 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacter
BD02T64_scaffold_5241_2
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(189..1115)
DNA (927bp) protein (309aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase {ECO:0000313|EMBL:KGL63346.1}; EC=2.3.1.- {ECO:0000313|EMBL:KGL63346.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Fla
UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase n=1 Tax=Polaribacter sp. MED152 RepID=A2U227_9FLAO
lpxD1; UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase rbh
BD02T64_scaffold_5241_3
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1155..1721)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Polaribacter sp. MED152 RepID=A2U219_9FLAO rbh
efp; translation elongation factor P (EF-P)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae
BD02T64_scaffold_5241_4
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1749..2531)
DNA (783bp) protein (261aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=1121899 species="Bacteria; Bacteroidetes; F
lpxA; acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003789641 rbh
BD02T64_scaffold_5241_5
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2536..3930)
DNA (1395bp) protein (465aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; 3-hydroxyacyl-[
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Polaribacter sp. MED152 RepID=A2U221_9FLAO rbh
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase rbh
BD02T64_scaffold_5241_6
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3930..4961)
DNA (1032bp) protein (344aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteria
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Polaribacter sp. MED152 RepID=A2U222_9FLAO rbh
lpxD3; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
BD02T64_scaffold_5241_7
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4985..6196)
DNA (1212bp) protein (404aa)
phosphohydrolase n=1 Tax=Polaribacter franzmannii RepID=UPI0003724C66
HD superfamily phosphohydrolase {ECO:0000313|EMBL:KGL63340.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter
HD superfamily phosphohydrolase
BD02T64_scaffold_5241_8
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6385..7932
DNA (1548bp) protein (516aa)
Two-component system response regulator n=1 Tax=Polaribacter sp. MED152 RepID=A2U218_9FLAO rbh
Two-component system response regulator, CheY-like superfamily {ECO:0000313|EMBL:KGL63339.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polar
two-component system response regulator
BD02T64_scaffold_5241_9
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8401..8808
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00035DA025
putative P-loop hydrolase UPF0079 Tax=CG_Flavo_02
putative P-loop hydrolase UPF0079
BD02T64_scaffold_5241_10
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8814..10070
DNA (1257bp) protein (419aa)
ald1; alanine dehydrogenase (EC:1.4.1.1)
alanine dehydrogenase n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000360D660
Alanine dehydrogenase {ECO:0000313|EMBL:EAR11948.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 2
BD02T64_scaffold_5241_11
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10408..14061
DNA (3654bp) protein (1218aa)
Gliding motility-associated C-terminal domain-containing protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C4U9_9FLAO
Gliding motility-associated C-terminal domain-containing protein {ECO:0000313|EMBL:EJL64321.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Fla
hypothetical protein
BD02T64_scaffold_5241_12
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14119..14490
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U209_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41508.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_5241_13
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(14491..15081)
DNA (591bp) protein (197aa)
Uncharacterized protein id=3980049 bin=GWF2_Bacteroidetes_42_66 species=Flavobacterium sp. F52 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
BD02T64_scaffold_5241_14
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15184..15639
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DYA0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP96104.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
BD02T64_scaffold_5241_15
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15686..16360)
DNA (675bp) protein (225aa)
SpoU rRNA methylase family protein {ECO:0000313|EMBL:KGL61050.1}; EC=2.1.1.34 {ECO:0000313|EMBL:KGL61050.1};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobac
SpoU protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1E7_9FLAO
SpoU rRNA methylase family protein
BD02T64_scaffold_5241_16
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16588..17265
DNA (678bp) protein (226aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1250005 speci
Sir2 family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U212_9FLAO
Sir2 family protein
BD02T64_scaffold_5241_17
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17351..17821)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1G3_9FLAO rbh
Histidyl-tRNA synthetase {ECO:0000313|EMBL:KGL63332.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. He
hypothetical protein
BD02T64_scaffold_5241_18
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17884..18477)
DNA (594bp) protein (198aa)
OmpA-related protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1G4_9FLAO
tonb-dependent receptor plug Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
TonB-dependent receptor
BD02T64_scaffold_5241_19
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18443..19366)
DNA (924bp) protein (308aa)
OmpA-related protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1G4_9FLAO
OmpA-related protein {ECO:0000313|EMBL:EAR11967.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23
TonB-dependent receptor
BD02T64_scaffold_5241_20
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19429..20949)
DNA (1521bp) protein (507aa)
OmpA-related protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1G4_9FLAO
OmpA-related protein {ECO:0000313|EMBL:EAR11967.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23
TonB dependent/ligand-gated channel
BD02T64_scaffold_5241_21
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(21045..21491)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Polaribacter franzmannii RepID=UPI00036A3857 rbh
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp
rplI; 50S ribosomal protein L9
BD02T64_scaffold_5241_22
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(21508..21804)
DNA (297bp) protein (99aa)
30S ribosomal protein S18 n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00036D9115
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter s
rpsR; 30S ribosomal protein S18
BD02T64_scaffold_5241_23
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(21808..22134)
DNA (327bp) protein (109aa)
30S ribosomal protein S6 n=1 Tax=Polaribacter sp. MED152 RepID=A2U1Z5_9FLAO
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp.
Displaying 23 items

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