ggKbase home page

BD02T64_scaffold_1296

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1296_1
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21..845)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000361A888
Outer membrane lipoprotein {ECO:0000313|EMBL:KGL63076.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp.
hypothetical protein
BD02T64_scaffold_1296_2
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(969..1481)
DNA (513bp) protein (171aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacte
RsgA n=1 Tax=Kordia algicida OT-1 RepID=A9DLH3_9FLAO
ferritin-like protein 2
BD02T64_scaffold_1296_3
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1492..2367)
DNA (876bp) protein (292aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52) Tax=CG_Flavo_02
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Polaribacter sp. MED152 RepID=A2U4B1_9FLAO rbh
BD02T64_scaffold_1296_4
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2501..3019)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00037248E1
Uncharacterized protein {ECO:0000313|EMBL:KGL63073.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
BD02T64_scaffold_1296_5
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3075..3836
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00036522EC
putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase
Tax=BJP_08E140C01_Flavobacteriales_35_8
BD02T64_scaffold_1296_6
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3838..4752
DNA (915bp) protein (305aa)
5'-nucleotidase {ECO:0000313|EMBL:KGL59895.1}; EC=3.1.3.5 {ECO:0000313|EMBL:KGL59895.1};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribac
5'-nucleotidase (EC:3.1.3.5)
metallophosphoesterase n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255B3B7
BD02T64_scaffold_1296_7
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4798..5184
DNA (387bp) protein (129aa)
DoxX family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U4B3_9FLAO rbh
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:EAQ41001.2}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;
BD02T64_scaffold_1296_8
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5245..5913)
DNA (669bp) protein (223aa)
YhhN family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJM0_9BACT
YhhN family protein {ECO:0000313|EMBL:KGL63071.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85
hypothetical protein
BD02T64_scaffold_1296_9
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6016..8016)
DNA (2001bp) protein (667aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1250005 species="Bacteri
ligA; DNA ligase, NAD-dependent (EC:6.5.1.2) rbh
DNA ligase n=1 Tax=Polaribacter sp. MED152 RepID=A2U468_9FLAO rbh
BD02T64_scaffold_1296_10
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8039..8602)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RIK7_CELLC rbh
Uncharacterized protein {ECO:0000313|EMBL:EWH14323.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojens
hypothetical protein
BD02T64_scaffold_1296_11
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8706..10148)
DNA (1443bp) protein (481aa)
gapA3; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:EAQ41045.1}; EC=1.2.1.12 {ECO:0000313|EMBL:EAQ41045.1};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Fla
Glyceraldehyde 3-phosphate dehydrogenase n=1 Tax=Polaribacter sp. MED152 RepID=A2U469_9FLAO
BD02T64_scaffold_1296_12
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10302..11684)
DNA (1383bp) protein (461aa)
Periplasmic serine protease n=1 Tax=uncultured Polaribacter sp. RepID=F4MLF2_9FLAO
HtrA protease/chaperone protein {ECO:0000313|EMBL:KGL59162.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter
trypsin-like serine protease
BD02T64_scaffold_1296_13
uncultured Polaribacter sp., Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11824..12594
DNA (771bp) protein (257aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=174711 species="Bacteria; Bact
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=uncultured Polaribacter sp. RepID=F4MLF3_9FLAO
BD02T64_scaffold_1296_14
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12594..13118
DNA (525bp) protein (175aa)
Acetyltransferase n=1 Tax=Polaribacter irgensii 23-P RepID=A4C2N2_9FLAO
acetyltransferase (GNAT) family protein Tax=CG_Flavo_02
acetyltransferase (GNAT) family protein
BD02T64_scaffold_1296_15
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13111..14145
DNA (1035bp) protein (345aa)
Aminodeoxychorismate lyase n=1 Tax=uncultured Polaribacter sp. RepID=F4MLF5_9FLAO
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KGL59159.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp.
aminodeoxychorismate lyase
BD02T64_scaffold_1296_16
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14149..15048
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GBZ1_LACS5
Uncharacterized protein {ECO:0000313|EMBL:KGL62968.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
BD02T64_scaffold_1296_17
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15143..15712
DNA (570bp) protein (190aa)
peptidoglycan-binding protein LysM n=1 Tax=Polaribacter franzmannii RepID=UPI00038184E6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41040.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_1296_18
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15709..16455)
DNA (747bp) protein (249aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; K
lepB; LepB protein (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Kordia algicida OT-1 RepID=A9DM85_9FLAO
BD02T64_scaffold_1296_19
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16400..17107)
DNA (708bp) protein (236aa)
Tetrapyrrole methylase family protein n=1 Tax=uncultured Polaribacter sp. RepID=F4MLF7_9FLAO rbh
Tetrapyrrole (Corrin-porphyrin) methylase family protein {ECO:0000313|EMBL:KGL62966.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacte
tetrapyrrole (corrin/porphyrin) methylase
BD02T64_scaffold_1296_20
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17104..17559)
DNA (456bp) protein (152aa)
ptpA; low molecular weight phosphotyrosine protein phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EAQ41038.1}; EC=3.1.3.48 {ECO:0000313|EMBL:EAQ41038.1};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavo
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Polaribacter sp. MED152 RepID=A2U478_9FLAO
BD02T64_scaffold_1296_21
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17570..18997)
DNA (1428bp) protein (476aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Polaribacter sp. MED152 RepID=A2U477_9FLAO rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavo
dnaA; chromosomal replication initiator protein DnaA
BD02T64_scaffold_1296_22
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19201..19599
DNA (399bp) protein (133aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RFA3_CELLC
Acyl-CoA thioester hydrolase, YbgC/YbaW family {ECO:0000313|EMBL:ETN95659.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zho
thioesterase
BD02T64_scaffold_1296_23
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19600..20214)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000367DC34
Uncharacterized protein {ECO:0000313|EMBL:KGL61668.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
putative protein family UPF0029
BD02T64_scaffold_1296_24
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20214..21074)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DYS4_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP96172.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
BD02T64_scaffold_1296_25
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21071..21682)
DNA (612bp) protein (204aa)
haloacid dehalogenase n=1 Tax=Polaribacter franzmannii RepID=UPI00036D8C1A
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:KGL62959.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polarib
hypothetical protein
BD02T64_scaffold_1296_26
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21675..22712)
DNA (1038bp) protein (346aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Polaribacter irgensii 23-P RepID=A4C2P1_9FLAO rbh
ribD; riboflavin biosynthesis protein RibD Tax=CG_Flavo_02
ribD; riboflavin biosynthesis protein RibD
BD02T64_scaffold_1296_27
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22804..23295
DNA (492bp) protein (164aa)
acetyltransferase n=1 Tax=Polaribacter franzmannii RepID=UPI0003718A32
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KGL62956.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Pola
acetyltransferase (GNAT) family protein
BD02T64_scaffold_1296_28
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23297..23872
DNA (576bp) protein (192aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003762F62
hemK; methyltransferase, HemK family
BD02T64_scaffold_1296_29
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24135..24662
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZ24_9FLAO
FMN-binding protein pyridoxamine 5'-phosphate oxidase-related protein {ECO:0000313|EMBL:KGL59733.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae
putative pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
BD02T64_scaffold_1296_30
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25079..25522
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KGL61657.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
Displaying items 1-30 of 79 in total

View Taxonomy