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BD02T64_scaffold_1482

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1482_1
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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54..992
DNA (939bp) protein (313aa)
NusB family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U300_9FLAO
nusB; NusB family protein
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="P
BD02T64_scaffold_1482_2
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1023..1490
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003785947
protein of unknown function (DUF1573) Tax=CG_Flavo_02
protein of unknown function (DUF1573)
BD02T64_scaffold_1482_3
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1507..1818
DNA (312bp) protein (104aa)
Preprotein translocase subunit n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Z2_9FLAO rbh
yajC; preprotein translocase subunit
Preprotein translocase subunit {ECO:0000313|EMBL:EAQ41175.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter s
BD02T64_scaffold_1482_4
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1937..2878
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Z3_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGL60664.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
BD02T64_scaffold_1482_5
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2878..3474
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1336803 species="Bacteria; B
coaE; dephospho-CoA kinase (EC:2.7.1.24)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000370E40B
BD02T64_scaffold_1482_6
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3590..5140
DNA (1551bp) protein (517aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Pol
two-component system sensor histidine kinase (EC:2.7.13.3)
histidine kinase n=1 Tax=Polaribacter franzmannii RepID=UPI000367564B
BD02T64_scaffold_1482_7
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5159..5854
DNA (696bp) protein (232aa)
transcriptional regulator n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000382A585 rbh
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:EAQ41179.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polar
BD02T64_scaffold_1482_8
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5944..6564
DNA (621bp) protein (207aa)
YrdC protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y8_9FLAO
YrdC protein
YrdC protein {ECO:0000313|EMBL:EAQ41180.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;"
BD02T64_scaffold_1482_9
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6608..7606)
DNA (999bp) protein (333aa)
Glycosyltransferase, GT2 family {ECO:0000313|EMBL:KGL60669.1}; EC=2.4.1.- {ECO:0000313|EMBL:KGL60669.1};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteri
glycosyl transferase family 2 n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003654787 rbh
glycosyl transferase family 2 rbh
BD02T64_scaffold_1482_10
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7663..8106)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4C077_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR12820.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
hypothetical protein
BD02T64_scaffold_1482_11
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8124..9128
DNA (1005bp) protein (335aa)
DNA polymerase III subunit delta {ECO:0000313|EMBL:KGL63877.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KGL63877.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacter
DNA polymerase III delta subunit (EC:2.7.7.7)
DNA polymerase III subunit delta n=1 Tax=Polaribacter franzmannii RepID=UPI0003736489
BD02T64_scaffold_1482_12
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9314..10363)
DNA (1050bp) protein (350aa)
peptidase M28 n=1 Tax=Polaribacter franzmannii RepID=UPI00035D0E19 rbh
peptidase family M28 Tax=CG_Flavo_02
peptidase family M28
BD02T64_scaffold_1482_13
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10431..11231)
DNA (801bp) protein (267aa)
ABC-type transporter n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y4_9FLAO
Iron(III) ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KGL60715.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" sourc
ABC-type transporter
BD02T64_scaffold_1482_14
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11234..12265)
DNA (1032bp) protein (344aa)
Iron transport system permease n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y5_9FLAO
Iron ABC transporter {ECO:0000313|EMBL:KGL63790.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_8
iron transport system permease
BD02T64_scaffold_1482_15
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(12267..12845)
DNA (579bp) protein (193aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y6_9FLAO
Ham1 family protein
BD02T64_scaffold_1482_16
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13048..13833
DNA (786bp) protein (262aa)
Uncharacterized protein {ECO:0000313|EMBL:EZH71793.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
Putative transcriptional regulator id=3228562 bin=GWF2_Bacteroidetes_33_16 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
putative transcriptional regulator
BD02T64_scaffold_1482_17
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13835..14998
DNA (1164bp) protein (388aa)
alkaline phosphatase IV (EC:3.1.3.1)
Alkaline phosphatase IV n=1 Tax=Bacillus megaterium (strain ATCC 12872 / QMB1551) RepID=D5E1J7_BACMQ
Alkaline phosphatase {ECO:0000313|EMBL:KJJ37754.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivost
BD02T64_scaffold_1482_18
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15004..15477)
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
50S rRNA methyltransferase n=1 Tax=Polaribacter franzmannii RepID=UPI00036E0EB5
hypothetical protein
BD02T64_scaffold_1482_19
Polaribacter filamentus, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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15651..16508
DNA (858bp) protein (286aa)
Quinolinate phosphoribosyl transferase {ECO:0000313|EMBL:AAQ86999.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AAQ86999.1};; TaxID=53483 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavob
nadC; nicotinate-nucleotide diphosphorylase (carboxylating) (EC:2.4.2.19)
Quinolinate phosphoribosyl transferase n=1 Tax=Polaribacter filamentus RepID=Q6W749_9FLAO
BD02T64_scaffold_1482_20
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16608..17180
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y1_9FLAO rbh
Protein McbG {ECO:0000313|EMBL:KGL63785.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
hypothetical protein
BD02T64_scaffold_1482_21
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17332..18273
DNA (942bp) protein (314aa)
ribonuclease BN n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037F7818
Ribonuclease BN {ECO:0000313|EMBL:KGL60722.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.
ribonuclease BN-like family protein
BD02T64_scaffold_1482_22
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


18381..19745
DNA (1365bp) protein (455aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1U9_9FLAO rbh
BD02T64_scaffold_1482_23
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19768..20481
DNA (714bp) protein (238aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE1; GTP cyclohydrolase I (EC:3.5.4.16) rbh
GTP cyclohydrolase I n=1 Tax=Polaribacter franzmannii RepID=UPI0003677789 rbh
BD02T64_scaffold_1482_24
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20704..21186
DNA (483bp) protein (161aa)
RNA polymerase sigma-70 factor n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UPG4_9FLAO
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDP69751.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
RNA polymerase sigma-70 factor
BD02T64_scaffold_1482_25
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21155..21763
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2X8_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41197.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_1482_26
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21766..22752
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2W9_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41198.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_1482_27
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22802..23209)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2X6_9FLAO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41195.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_1482_28
unknown

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comp(23283..23516)
DNA (234bp) protein (78aa)

This feature has no annotations

BD02T64_scaffold_1482_29
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23495..26839)
DNA (3345bp) protein (1115aa)
Protein translocase subunit SecA n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1U7_9FLAO
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
secA; preprotein translocase SecA subunit
BD02T64_scaffold_1482_30
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27001..27312)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037297CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41201.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
Displaying 30 items

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