ggKbase home page

BD02T64_scaffold_482

Search features with annotation key words

Displaying items 1-30 of 86 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_482_1
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(73..2802)
DNA (2730bp) protein (910aa)
sucA; 2-oxoglutarate dehydrogenase, E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 component {ECO:0000313|EMBL:EAQ42636.1}; EC=1.2.4.2 {ECO:0000313|EMBL:EAQ42636.1};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Fl
2-oxoglutarate dehydrogenase, E1 component n=1 Tax=Polaribacter sp. MED152 RepID=A2TYT2_9FLAO rbh
BD02T64_scaffold_482_2
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3174..3635)
DNA (462bp) protein (154aa)
transcriptional regulator n=1 Tax=Polaribacter franzmannii RepID=UPI0003715D83
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KGL60236.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polar
transcription regulator, AsnC family
BD02T64_scaffold_482_3
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3744..5084)
DNA (1341bp) protein (447aa)
accC; acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EAQ42895.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EAQ42895.1};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Fl
acetyl-CoA carboxylase subunit alpha n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003708778 rbh
BD02T64_scaffold_482_4
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5166..5645)
DNA (480bp) protein (160aa)
Biotin-requiring enzyme n=1 Tax=Polaribacter sp. MED152 RepID=A2TY31_9FLAO
Biotin carboxyl carrier protein of acetyl-CoA carboxylase {ECO:0000313|EMBL:KGL58731.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribact
biotin-requiring enzyme
BD02T64_scaffold_482_5
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5673..6668)
DNA (996bp) protein (332aa)
fabH3; 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Polaribacter sp. MED152 RepID=A2TY30_9FLAO
BD02T64_scaffold_482_6
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6842..7036)
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=1 Tax=Polaribacter franzmannii RepID=UPI00037F2EF6
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp
BD02T64_scaffold_482_7
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7038..7574)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2TY28_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGL58734.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
BD02T64_scaffold_482_8
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7658..8692)
DNA (1035bp) protein (345aa)
pdxA; pyridoxal phosphate biosynthetic protein PdxA (EC:1.1.1.262) Tax=CG_Flavo_02
pdxA; pyridoxal phosphate biosynthetic protein PdxA (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Polaribacter franzmannii RepID=UPI000378DFA2
BD02T64_scaffold_482_9
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8757..9347
DNA (591bp) protein (197aa)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KGL60229.1}; EC=2.5.1.9 {ECO:0000313|EMBL:KGL60229.1};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacte
ribE; riboflavin synthase alpha chain (EC:2.5.1.9)
Riboflavin synthase, alpha subunit id=2763753 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
BD02T64_scaffold_482_10
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9771..10790)
DNA (1020bp) protein (340aa)
Putative isoprenoid biosynthesis related protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BXP6_9FLAO rbh
Polyprenyl synthetase {ECO:0000313|EMBL:KGL60173.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_
polyprenyl synthetase
BD02T64_scaffold_482_11
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10806..11477
DNA (672bp) protein (224aa)
Transcriptional regulator, tetR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DN86_9FLAO
Transcriptional regulator, tetR family protein {ECO:0000313|EMBL:EDP97135.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kord
transcriptional regulator, TetR family
BD02T64_scaffold_482_12
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11479..12828
DNA (1350bp) protein (450aa)
transporter n=1 Tax=Polaribacter franzmannii RepID=UPI00037F2827
Outer membrane efflux protein {ECO:0000313|EMBL:KGL58740.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter s
outer membrane efflux protein
BD02T64_scaffold_482_13
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12839..14011
DNA (1173bp) protein (391aa)
RND transporter n=1 Tax=Polaribacter franzmannii RepID=UPI00038299CA
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KGL58741.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="
RND transporter
BD02T64_scaffold_482_14
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14025..17489
DNA (3465bp) protein (1155aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BXP2_9FLAO rbh
RND multidrug efflux transporter, Acriflavin resistance protein {ECO:0000313|EMBL:KGL58742.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Pola
acriflavin resistance protein
BD02T64_scaffold_482_15
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17632..18108
DNA (477bp) protein (159aa)
recombinase RecX n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037048AF
Transcriptional regulator, RecX family {ECO:0000313|EMBL:KGL60168.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polar
RecX family protein
BD02T64_scaffold_482_16
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18113..18631)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2TYG4_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGL60167.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
BD02T64_scaffold_482_17
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18628..19185)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037966F3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR13730.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
hypothetical protein
BD02T64_scaffold_482_18
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19365..20303
DNA (939bp) protein (313aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2TYG1_9FLAO
NAD dependent epimerase/dehydratase family protein
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EAQ42759.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" so
BD02T64_scaffold_482_19
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20494..21087
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037FCD0F rbh
Thioredoxin {ECO:0000313|EMBL:KGL60165.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.;"
hypothetical protein
BD02T64_scaffold_482_20
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21231..21716
DNA (486bp) protein (162aa)
ABC transporter ATPase n=1 Tax=Polaribacter franzmannii RepID=UPI00037F4847
ABC transporter ATPase {ECO:0000313|EMBL:KGL58749.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1
hypothetical protein
BD02T64_scaffold_482_21
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21708..22250)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BY63_9FLAO
Uncharacterized protein Tax=CG_Flavo_02
BD02T64_scaffold_482_22
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22279..22971)
DNA (693bp) protein (231aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
truB; tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Polaribacter sp. MED152 RepID=A2TXT4_9FLAO
BD02T64_scaffold_482_23
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23052..23846)
DNA (795bp) protein (265aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
bacA; bacitracin resistance protein BacA (EC:3.6.1.27)
UDP-diphosphatase n=1 Tax=Polaribacter franzmannii RepID=UPI00037EC370
BD02T64_scaffold_482_24
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23847..24086)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000363F30A rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
BD02T64_scaffold_482_25
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24093..24884)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000363FFD1
Cell division protein FtsX {ECO:0000313|EMBL:KGL62047.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp.
ftsX; cell division protein FtsX
BD02T64_scaffold_482_26
unknown

Not on your lists

24901..25008
DNA (108bp) protein (36aa)

This feature has no annotations

BD02T64_scaffold_482_27
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25023..25445)
DNA (423bp) protein (141aa)
Methylmalonyl-CoA epimerase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R3L4_OWEHD rbh
methylmalonyl-CoA epimerase
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:AEV33070.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkonge
BD02T64_scaffold_482_28
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25906..26532
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00035E74D1 rbh
hypothetical protein Tax=CG_Flavo_02
hypothetical protein
BD02T64_scaffold_482_29
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26542..27150
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003758DBC
hypothetical protein Tax=CG_Flavo_02
hypothetical protein
BD02T64_scaffold_482_30
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27105..27878
DNA (774bp) protein (258aa)
two-component system sensor histidine kinase (EC:2.7.13.3) rbh
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003788800 rbh
Two-component system sensor histidine kinase {ECO:0000313|EMBL:KGL58976.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source=
Displaying items 1-30 of 86 in total

View Taxonomy