ggKbase home page

BD02T64_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_118_1
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(187..357)
DNA (171bp) protein (57aa)
Transposase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K6M9_9FLAO
Transposase-like protein {ECO:0000313|EMBL:KGE12464.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingoba
integrase
BD02T64_scaffold_118_2
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(549..737)
DNA (189bp) protein (63aa)
Transposase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NBF1_9BACT
Transposase {ECO:0000313|EMBL:EMR04526.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
BD02T64_scaffold_118_3
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

935..1240
DNA (306bp) protein (102aa)
Carbohydrate binding domain protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EGY0_9FLAO
RHS repeat-associated core domain protein
Tax=BJP_IG2102_Flavobacteriales_34_12
BD02T64_scaffold_118_4
unknown

Not on your lists

1237..1440
DNA (204bp) protein (68aa)

This feature has no annotations

BD02T64_scaffold_118_5
unknown

Not on your lists

1563..1748
DNA (186bp) protein (62aa)

This feature has no annotations

BD02T64_scaffold_118_6
unknown

Not on your lists

1758..2588
DNA (831bp) protein (277aa)

This feature has no annotations

BD02T64_scaffold_118_7
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2898..3053
DNA (156bp) protein (52aa)
RHS repeat-associated core domain protein-containing protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2J345_9FLAO
RHS repeat-associated core domain protein-containing protein {ECO:0000313|EMBL:EJL62505.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavoba
hypothetical protein
BD02T64_scaffold_118_8
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3138..3284
DNA (147bp) protein (49aa)
Acyl carrier protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YYU1_AEQSU
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flav
BD02T64_scaffold_118_9
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

Not on your lists

3395..4612
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ETV3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM43114.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
LSU m5C1962 methyltransferase RlmI
BD02T64_scaffold_118_10
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4737..5543
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DPX5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP97548.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
BD02T64_scaffold_118_11
unknown

Not on your lists

5680..5835
DNA (156bp) protein (52aa)

This feature has no annotations

BD02T64_scaffold_118_12

Not on your lists

comp(5882..6184)
DNA (303bp) protein (101aa)
Ribosomal subunit interface protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XBI1_CELAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO00103.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S30
BD02T64_scaffold_118_13
Dokdonia sp. 4H-3-7-5, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6619..7809)
DNA (1191bp) protein (397aa)
Major facilitator superfamily MFS_1 n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AWQ5_KROS4 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEE20638.1}; Flags: Precursor;; TaxID=983548 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" so
BD02T64_scaffold_118_14
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7882..8253
DNA (372bp) protein (124aa)
Cystathionine gamma-lyase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AND2_MARSH
cystathionine gamma-lyase
Cystathionine gamma-lyase {ECO:0000313|EMBL:EAR02504.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strai
BD02T64_scaffold_118_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8214..8507
DNA (294bp) protein (98aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:KGJ91207.1}; EC=4.4.1.8 {ECO:0000313|EMBL:KGJ91207.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; C
Aminotransferase class-V family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V0W6_CLOBI
cystathionine gamma-lyase
BD02T64_scaffold_118_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9631..10116
DNA (486bp) protein (162aa)
Transcriptional regulator, MarR family n=3 Tax=Clostridium botulinum RepID=B1QC89_CLOBO
MarR family transcriptional regulator {ECO:0000313|EMBL:EKN40816.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinu
MarR family transcriptional regulator
BD02T64_scaffold_118_17
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10106..11059
DNA (954bp) protein (318aa)
tdcB; L-threonine dehydratase catabolic TdcB (EC:4.3.1.17 4.3.1.19)
L-threonine dehydratase catabolic TdcB {ECO:0000313|EMBL:CEG57597.1}; EC=4.3.1.17 {ECO:0000313|EMBL:CEG57597.1};; EC=4.3.1.19 {ECO:0000313|EMBL:CEG57597.1};; TaxID=1212491 species="Bacteria; Proteobac
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000375B07B rbh
BD02T64_scaffold_118_18
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11198..11581
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002558B46 rbh
Uncharacterized protein {ECO:0000313|EMBL:ELR73753.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
BD02T64_scaffold_118_19
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11590..12393
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI00028886C9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD03843.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
BD02T64_scaffold_118_20
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12407..13306
DNA (900bp) protein (300aa)
hydrolase TatD n=1 Tax=Aquimarina agarilytica RepID=UPI00028980FC rbh
Hydrolase TatD {ECO:0000313|EMBL:KFF08898.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytopha
hydrolase TatD
BD02T64_scaffold_118_21
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13308..14198
DNA (891bp) protein (297aa)
UbiA prenyltransferase n=1 Tax=Aquimarina agarilytica RepID=UPI000288D15D rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF08899.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
ubia prenyltransferase
BD02T64_scaffold_118_22
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14201..15349
DNA (1149bp) protein (383aa)
3-dehydroquinate synthase {ECO:0000313|EMBL:KFF08900.1}; EC=4.2.3.4 {ECO:0000313|EMBL:KFF08900.1};; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Fla
3-dehydroquinate synthase (EC:4.2.3.4)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00038082D7 rbh
BD02T64_scaffold_118_23
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15352..16563
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI0002883A4D rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF08901.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
hypothetical protein
BD02T64_scaffold_118_24
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16567..17931
DNA (1365bp) protein (455aa)
Phosphodiesterase n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C3S0_9BACT rbh
Phosphodiesterase {ECO:0000313|EMBL:KFF08902.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cyto
hypothetical protein
BD02T64_scaffold_118_25
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18046..18345)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF16594.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
BD02T64_scaffold_118_26
unknown

Not on your lists

comp(18873..19112)
DNA (240bp) protein (80aa)

This feature has no annotations

BD02T64_scaffold_118_27
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19479..21596)
DNA (2118bp) protein (706aa)
Fis family transcriptional regulator n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AF57
Fis family transcriptional regulator
Sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family {ECO:0000313|EMBL:AEE53006.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospir
BD02T64_scaffold_118_28
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21744..22634
DNA (891bp) protein (297aa)
pirin n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AF56
Pirin {ECO:0000313|EMBL:ESU29458.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902
pirin-like protein
BD02T64_scaffold_118_29
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22677..23432
DNA (756bp) protein (252aa)
Isochorismatase hydrolase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWW6_9FLAO rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:ESU18968.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium c
chloroperoxidase
BD02T64_scaffold_118_30
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23492..25288
DNA (1797bp) protein (599aa)
amidohydrolase n=1 Tax=Psychrobacter lutiphocae RepID=UPI00037E4136 rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25409.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Fl
amidohydrolase 3
Displaying items 1-30 of 140 in total

View Taxonomy