ggKbase home page

BD02T64_scaffold_4603

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_4603_1
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(151..366)
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=6 Tax=Flavobacteriales RepID=F6GJY3_LACS5 rbh
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075, ECO:0000313|EMBL:AJR02446.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
BD02T64_scaffold_4603_2
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(378..1730)
DNA (1353bp) protein (451aa)
Protein translocase subunit SecY n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KJX5_9FLAO rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; J
preprotein translocase secY subunit
BD02T64_scaffold_4603_3
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(1750..2202)
DNA (453bp) protein (151aa)
50S ribosomal protein L15 n=1 Tax=Formosa sp. AK20 RepID=M7MH50_9FLAO
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimar
50S ribosomal protein L15
BD02T64_scaffold_4603_4
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2217..2396)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Formosa sp. AK20 RepID=M7ME17_9FLAO
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrov
rpmD; 50S ribosomal protein L30
BD02T64_scaffold_4603_5
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2408..2932)
DNA (525bp) protein (175aa)
30S ribosomal protein S5 n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GJY7_LACS5
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutri
BD02T64_scaffold_4603_6
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2939..3295)
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KHJ7_9FLAO rbh
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrovimonas.;" source="Mangrovimonas
LSU ribosomal protein L18p
BD02T64_scaffold_4603_7
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(3306..3848)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KJW8_9FLAO
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrovi
50S ribosomal protein L6
BD02T64_scaffold_4603_8
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(3866..4243)
DNA (378bp) protein (126aa)
30S ribosomal protein S8 n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KIM8_9FLAO
SSU ribosomal protein S8p
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyel
BD02T64_scaffold_4603_9
Flavobacteria bacterium MS024-3C, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(4311..4580)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BMA9_9BACT rbh
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=487797 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium MS024-3C.;"
30S ribosomal protein S14
BD02T64_scaffold_4603_10
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(4584..5135)
DNA (552bp) protein (184aa)
50S ribosomal protein L5 n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VUJ3_9FLAO
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyel
LSU ribosomal protein L5p
BD02T64_scaffold_4603_11
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(5141..5467)
DNA (327bp) protein (109aa)
50S ribosomal protein L24 n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI00037D9682 rbh
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
50S ribosomal protein L24
BD02T64_scaffold_4603_12
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(5467..5835)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KJW3_9FLAO rbh
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa
50S ribosomal protein L14
BD02T64_scaffold_4603_13
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(5838..6095)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BYS7_9FLAO rbh
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia
30S ribosomal protein S17
BD02T64_scaffold_4603_14
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6113..6304)
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KHE8_9FLAO rbh
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374, ECO:0000313|EMBL:CDF78282.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;
50S ribosomal protein L29
BD02T64_scaffold_4603_15
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6317..6736)
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GC01_LACS5
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutr
BD02T64_scaffold_4603_16
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6756..7472)
DNA (717bp) protein (239aa)
30S ribosomal protein S3 n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UGZ0_9FLAO rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
SSU ribosomal protein S3p
BD02T64_scaffold_4603_17
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(7476..7886)
DNA (411bp) protein (137aa)
50S ribosomal protein L22 n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GC03_LACS5 rbh
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutr
BD02T64_scaffold_4603_18
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(7892..8170)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GC04_LACS5 rbh
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;
hypothetical protein
BD02T64_scaffold_4603_19
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(8177..9004)
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KHE3_9FLAO rbh
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000313|EMBL:CDF78277.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;"
BD02T64_scaffold_4603_20
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(9015..9305)
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UGZ5_9FLAO
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;
50S ribosomal protein L23
BD02T64_scaffold_4603_21
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(9313..9987)
DNA (675bp) protein (225aa)
50S ribosomal protein L4 n=1 Tax=Formosa sp. AK20 RepID=M7MY70_9FLAO rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
50S ribosomal protein L4
BD02T64_scaffold_4603_22
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(9942..10559)
DNA (618bp) protein (206aa)
50S ribosomal protein L3 n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GC08_LACS5
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;"
50S ribosomal protein L3
BD02T64_scaffold_4603_23
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(10745..11050)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=5 Tax=Flavobacteriales RepID=F6GC09_LACS5
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus
BD02T64_scaffold_4603_24
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11062..13188)
DNA (2127bp) protein (709aa)
Elongation factor G n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UH00_9FLAO
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavoba
translation elongation factor G
BD02T64_scaffold_4603_25
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(13195..13671)
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AEE9 rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
SSU ribosomal protein S7p
BD02T64_scaffold_4603_26
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(13695..13841)
DNA (147bp) protein (49aa)
30S ribosomal protein S12 n=1 Tax=Kordia algicida OT-1 RepID=A9DIW4_9FLAO
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwa
Displaying 26 items

View Taxonomy