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BD02T64_scaffold_209

Search features with annotation key words

Displaying items 1-30 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_209_1
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..138
DNA (138bp) protein (46aa)
Elongation factor Tu n=1 Tax=Moritella sp. PE36 RepID=A6FH02_9GAMM
Tuf2, elongation factor Tu {ECO:0000313|EMBL:KGJ93459.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea s
tuf; elongation factor Tu
BD02T64_scaffold_209_2
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

679..948
DNA (270bp) protein (90aa)
mechanosensitive ion channel protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI000371B1B1
Uncharacterized protein {ECO:0000313|EMBL:KGJ93458.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
mechanosensitive ion channel protein MscS
BD02T64_scaffold_209_3
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1311..1772
DNA (462bp) protein (154aa)
Putative lipoprotein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A16_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ93457.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
lipoprotein
BD02T64_scaffold_209_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1837..2355)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A15_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ93456.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_209_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2348..3466)
DNA (1119bp) protein (373aa)
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:KGJ93455.1}; EC=1.14.19.1 {ECO:0000313|EMBL:KGJ93455.1};; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromon
stearoyl-CoA 9-desaturase (EC:1.14.19.1)
Delta-9 acyl-phospholipid desaturase n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SUZ4_PSYIN
BD02T64_scaffold_209_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3618..4241
DNA (624bp) protein (208aa)
Transcriptional regulator, TetR family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A13_COLP3
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:KGJ93454.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" so
DNA-binding transcriptional repressor FabR
BD02T64_scaffold_209_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4289..5386)
DNA (1098bp) protein (366aa)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011, ECO:0000256|SAAS:SAAS00055279}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {E
trmA; tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35)
tRNA (uracil-5-)-methyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00037D8713
BD02T64_scaffold_209_8
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5646..7712
DNA (2067bp) protein (689aa)
2,4-dienoyl-CoA reductase (NADPH) {ECO:0000313|EMBL:KGJ93451.1}; EC=1.3.1.34 {ECO:0000313|EMBL:KGJ93451.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colw
fadH1; 2,4-dienoyl-CoA reductase (EC:1.3.1.34)
2,4-dienoyl-CoA reductase n=1 Tax=Colwellia piezophila RepID=UPI00035D39B6
BD02T64_scaffold_209_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7871..10696)
DNA (2826bp) protein (942aa)
excinuclease ABC subunit A n=1 Tax=Colwellia piezophila RepID=UPI00035DD8A5
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; excinuclease ABC subunit A
BD02T64_scaffold_209_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11316..11627
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Idiomarina sp. A28L RepID=F7RVH7_9GAMM rbh
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotale
rpsJ; 30S ribosomal protein S10
BD02T64_scaffold_209_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11643..12281
DNA (639bp) protein (213aa)
50S ribosomal protein L3 n=1 Tax=Colwellia piezophila RepID=UPI00036DBDA2
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalass
rplC; 50S ribosomal protein L3
BD02T64_scaffold_209_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12299..12904
DNA (606bp) protein (202aa)
50S ribosomal protein L4 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RL4_COLP3
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea
rplD; 50S ribosomal protein L4
BD02T64_scaffold_209_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12901..13203
DNA (303bp) protein (101aa)
50S ribosomal protein L23 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RL23_COLP3
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalas
rplW; 50S ribosomal protein L23
BD02T64_scaffold_209_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13213..14037
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Colwellia piezophila RepID=UPI000376C604
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea
rplB; 50S ribosomal protein L2
BD02T64_scaffold_209_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14056..14334
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=4 Tax=Pseudoalteromonas RepID=U1JF76_9GAMM rbh
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotale
rpsS; 30S ribosomal protein S19
BD02T64_scaffold_209_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14346..14678
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RL22_COLP3
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalas
rplV; 50S ribosomal protein L22
BD02T64_scaffold_209_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14690..15388
DNA (699bp) protein (233aa)
30S ribosomal protein S3 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RS3_COLP3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea
rpsC; 30S ribosomal protein S3
BD02T64_scaffold_209_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15401..15814
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Colwellia piezophila RepID=UPI000381ED57
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalas
rplP; 50S ribosomal protein L16
BD02T64_scaffold_209_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15814..16005
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Rheinheimera perlucida RepID=UPI00035F0E7A rbh
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotale
rpmC; 50S ribosomal protein L29
BD02T64_scaffold_209_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16005..16253
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RS17_COLP3
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotale
rpsQ; 30S ribosomal protein S17
BD02T64_scaffold_209_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16534..18417
DNA (1884bp) protein (628aa)
Sensory box/GGDEF family protein n=1 Tax=Cellvibrio sp. BR RepID=I3IFC1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ93297.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
diguanylate cyclase domain-containing protein
BD02T64_scaffold_209_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18567..19634
DNA (1068bp) protein (356aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=DCUP_COLP3
BD02T64_scaffold_209_23
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19718..20119)
DNA (402bp) protein (134aa)
Putative signal transduction protein with CBS domains n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FUB7_SHESH
signal transduction protein
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ABV36440.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;"
BD02T64_scaffold_209_24
Vibrio ichthyoenteri, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20116..20466)
DNA (351bp) protein (117aa)
Nitrogen regulatory protein PII n=1 Tax=Vibrio sp. 16 RepID=B8KC20_9VIBR
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KIE20604.1}; TaxID=142461 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio ichthyoenteri.;
nitrogen regulatory protein P-II
BD02T64_scaffold_209_25
Vibrio sp. ER1A, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20468..21238)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D9F1_9VIBR
Membrane protein {ECO:0000313|EMBL:KFA98977.1}; TaxID=1517681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. ER1A.;"
membrane protein
BD02T64_scaffold_209_26
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21240..21962)
DNA (723bp) protein (241aa)
membrane protein n=1 Tax=Vibrio kanaloae RepID=UPI00030FEAE3
Membrane protein {ECO:0000313|EMBL:KKD58554.1}; TaxID=1581149 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia sp. AD028.;"
membrane protein
BD02T64_scaffold_209_27
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22309..23475
DNA (1167bp) protein (389aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Solitalea canadensis DSM 3403 RepID=H8KRS6_SOLCM id=717783 bin=RAAC39 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Solitalea canadensis DSM 3403 RepID=H8KRS6_SOLCM id=717783 bin=RAAC39 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
BD02T64_scaffold_209_28
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23573..23917
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:AEP31751.1}; TaxID=1085623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola nitrati
BD02T64_scaffold_209_29
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23964..24482
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YWC7_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC15555.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
hypothetical protein
BD02T64_scaffold_209_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24491..26263
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000362D03B rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ97143.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
Displaying items 1-30 of 157 in total

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