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BD02T64_scaffold_276

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Displaying items 1-30 of 64 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_276_1
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246..410)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003680386
Uncharacterized protein {ECO:0000313|EMBL:KHD09359.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
BD02T64_scaffold_276_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1123..1734
DNA (612bp) protein (204aa)
Toluene tolerance family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485W1_COLP3
toluene tolerance family protein
Toluene tolerance family protein {ECO:0000313|EMBL:AAZ26679.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psyc
BD02T64_scaffold_276_3
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2038..4035)
DNA (1998bp) protein (666aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKT3_POLNA
Fis family GAF modulated sigma54 specific transcriptional regulator Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
Fis family GAF modulated sigma54 specific transcriptional regulator
BD02T64_scaffold_276_4
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4592..6238
DNA (1647bp) protein (549aa)
LysR family transcriptional regulator n=1 Tax=Methyloversatilis universalis RepID=UPI00036F2BEE rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EON91763.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Ma
transcriptional regulator, LysR family
BD02T64_scaffold_276_5
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6254..7534
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PWC5_9RHOO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL25462.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
BD02T64_scaffold_276_6
Pseudomonas sp. GM49, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7714..8790
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Marinobacterium stanieri RepID=UPI000255A3DD
Uncharacterized protein {ECO:0000313|EMBL:EJM54900.1}; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
glycosyl hydrolase
BD02T64_scaffold_276_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8875..11265
DNA (2391bp) protein (797aa)
RND transporter n=1 Tax=Marinobacterium stanieri RepID=UPI000255A3DE
RND efflux transporter
Exporters of the RND superfamily {ECO:0000313|EMBL:AAZ46099.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromona
BD02T64_scaffold_276_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11569..12288
DNA (720bp) protein (240aa)
3-oxoadipate CoA-succinyl transferase, alpha subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485C5_COLP3
dxnG; 3-oxoadipate CoA-succinyl transferase subunit alpha
3-oxoadipate CoA-succinyl transferase, alpha subunit {ECO:0000313|EMBL:AAZ25679.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" so
BD02T64_scaffold_276_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12291..12947
DNA (657bp) protein (219aa)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:KGJ93350.1}; EC=2.8.3.5 {ECO:0000313|EMBL:KGJ93350.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colw
3-oxoadipate CoA-succinyl transferase, beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485C6_COLP3
dxnH; 3-oxoadipate CoA-succinyl transferase subunit beta
BD02T64_scaffold_276_10
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13598..14311)
DNA (714bp) protein (238aa)
Oxidoreductase, zinc-binding dehydrogenase family protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GMU7_9GAMM
Oxidoreductase, zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EPJ50737.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospi
zinc-binding dehydrogenase
BD02T64_scaffold_276_11
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14349..14780)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FWZ5_SHESH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV37368.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis
BD02T64_scaffold_276_12
unknown

Not on your lists

comp(14767..14961)
DNA (195bp) protein (65aa)

This feature has no annotations

BD02T64_scaffold_276_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(14994..16259)
DNA (1266bp) protein (422aa)
propanoyl-CoA c-acyltransferase (EC:2.3.1.176); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWB1_Spirochaetes_36_13_curated
propanoyl-CoA c-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase id=3319648 bin=GWB1_CP_36_13 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
BD02T64_scaffold_276_14
bacterium YEK0313, Bacteria

Not on your lists

comp(16320..17909)
DNA (1590bp) protein (530aa)
AMP-dependent synthetase and ligase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDU6_SPHWW
Long-chain-fatty-acid--CoA ligase FadD13 {ECO:0000313|EMBL:CEJ11716.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
AMP-dependent synthetase and ligase
BD02T64_scaffold_276_15

Not on your lists

comp(17915..18775)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PWB9_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KKL44568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_276_16
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18778..21054)
DNA (2277bp) protein (759aa)
Subunit of acetophenone carboxylase n=1 Tax=Azoarcus sp. KH32C RepID=H0PWC0_9RHOO
Subunit of acetophenone carboxylase {ECO:0000313|EMBL:BAL25457.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. K
apc; subunit of acetophenone carboxylase
BD02T64_scaffold_276_17
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21070..23217)
DNA (2148bp) protein (716aa)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22541.1}; EC=6.4.1.8 {ECO:0000313|EMBL:AJG22541.1};; TaxID=68895 species="Bacteria; Proteobacteria; Beta
Acetophenone carboxylase subunit Apc3 (EC:6.4.1.8)
Subunit of acetophenone carboxylase n=1 Tax=Azoarcus sp. KH32C RepID=H0PWC1_9RHOO
BD02T64_scaffold_276_18
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23279..23680)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9N6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ28504.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniired
BD02T64_scaffold_276_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23680..25620)
DNA (1941bp) protein (647aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABQ28505.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ABQ28505.1};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geob
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9N7_GEOUR
BD02T64_scaffold_276_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26739..27509)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Gayadomonas joobiniege RepID=UPI00037E0650 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ99351.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
putative molybdopterin biosynthesis MoeB protein
BD02T64_scaffold_276_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27509..29047)
DNA (1539bp) protein (513aa)
Thiamine-phosphate synthase {ECO:0000256|RuleBase:RU003826}; EC=2.5.1.3 {ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|RuleBase:RU003826}; TaxID=1535422 species="B
thiDE; phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase (EC:2.7.4.7)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000362A867
BD02T64_scaffold_276_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29047..29850)
DNA (804bp) protein (268aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliacea
Thiazole synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=THIG_COLP3
thiG; thiazole synthase
BD02T64_scaffold_276_23
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29866..30159)
DNA (294bp) protein (98aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A94_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ99348.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
thiS; thiamine biosynthesis protein ThiS
BD02T64_scaffold_276_24
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30134..31318)
DNA (1185bp) protein (395aa)
Oxidoreductase, FAD-dependent n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A95_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ99347.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
oxidoreductase, FAD-dependent
BD02T64_scaffold_276_25
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31321..33318)
DNA (1998bp) protein (666aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=THIC_COLP3
thiC; thiamine biosynthesis protein ThiC
BD02T64_scaffold_276_26
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33641..34504)
DNA (864bp) protein (288aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1JUE4_9GAMM
tryptophan 2,3-dioxygenase
BD02T64_scaffold_276_27
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34501..35886)
DNA (1386bp) protein (462aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; TaxID=1535422 species="Bacter
kynurenine 3-monooxygenase (EC:1.14.13.9) rbh
Kynurenine 3-monooxygenase n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KJM3_SHEWM rbh
BD02T64_scaffold_276_28
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35888..37171)
DNA (1284bp) protein (428aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-R
kynureninase (EC:3.7.1.3)
Kynureninase n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=KYNU_SHEWM
BD02T64_scaffold_276_29
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37174..37986)
DNA (813bp) protein (271aa)
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:KGJ99342.1}; EC=4.1.1.77 {ECO:0000313|EMBL:KGJ99342.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwell
4-oxalocrotonate decarboxylase (EC:4.1.1.77)
4-oxalocrotonate decarboxylase n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KJM5_SHEWM
BD02T64_scaffold_276_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38073..39113)
DNA (1041bp) protein (347aa)
Aminocarboxymuconate-semialdehyde decarboxylase {ECO:0000313|EMBL:KGJ99341.1}; EC=4.1.1.45 {ECO:0000313|EMBL:KGJ99341.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alterom
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45) rbh
Aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KJM6_SHEWM rbh
Displaying items 1-30 of 64 in total

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