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BD02T64_scaffold_562

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_562_1
Vibrio navarrensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..148
DNA (147bp) protein (49aa)
Mobile element protein n=2 Tax=Vibrio fluvialis I21563 RepID=S7I103_VIBFL rbh
Transposase {ECO:0000313|EMBL:KGK12491.1}; TaxID=29495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio navarrensis.;"
BD02T64_scaffold_562_2
Shewanella halifaxensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(875..1102)
DNA (228bp) protein (76aa)
Integrase family protein n=1 Tax=Shewanella halifaxensis (strain HAW-EB4) RepID=B0TL61_SHEHH
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ABZ78606.1}; TaxID=458817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella halifaxen
BD02T64_scaffold_562_3
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1136..1792)
DNA (657bp) protein (219aa)
Phage integrase n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8G180_SHESH
phage integrase
Phage integrase {ECO:0000313|EMBL:ABV38853.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis (strain
BD02T64_scaffold_562_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2284..3135)
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VU3_COLP3
hypothetical protein
BD02T64_scaffold_562_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3225..5168
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI000376ED52 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK01196.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_562_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5544..6134
DNA (591bp) protein (197aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
phosphoheptose isomerase (EC:5.3.1.-)
Phosphoheptose isomerase n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SMJ1_FERBD rbh
BD02T64_scaffold_562_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6165..6728
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1KU86_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK01199.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
ecfH; hypothetical protein
BD02T64_scaffold_562_8
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6810..7217)
DNA (408bp) protein (136aa)
Stringent starvation protein B n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VT8_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK01200.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
sspB; ClpXP protease specificity-enhancing factor
BD02T64_scaffold_562_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7227..7868)
DNA (642bp) protein (214aa)
Stringent starvation protein A n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VT7_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK01201.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
sspA; stringent starvation protein A
BD02T64_scaffold_562_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8050..8799)
DNA (750bp) protein (250aa)
petC; ubiquinol-cytochrome c reductase, cytochrome c1 (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase, cytochrome c1 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VT6_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK01202.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
BD02T64_scaffold_562_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8799..10064)
DNA (1266bp) protein (422aa)
petB; ubiquinol-cytochrome c reductase, cytochrome b (EC:1.10.2.2)
Cytochrome b n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VT5_COLP3
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp. ND16A.;"
BD02T64_scaffold_562_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10064..10654)
DNA (591bp) protein (197aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria;
petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VT4_COLP3
BD02T64_scaffold_562_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11194..11586)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RS9_COLP3
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalass
rpsI; 30S ribosomal protein S9
BD02T64_scaffold_562_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11590..12018)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Colwellia piezophila RepID=UPI000375A86D
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalas
rplM; 50S ribosomal protein L13
BD02T64_scaffold_562_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12569..13684)
DNA (1116bp) protein (372aa)
ATPase, AFG1 family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W29_COLP3
Cell division protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; Z ring-associated protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Al
AFG1 family ATPase
BD02T64_scaffold_562_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13867..14319
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W28_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98977.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_562_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14480..15847
DNA (1368bp) protein (456aa)
HtrA2 peptidase {ECO:0000313|EMBL:KGJ98976.1}; EC=3.4.21.108 {ECO:0000313|EMBL:KGJ98976.1};; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; C
degP; serine protease DegP (EC:3.4.21.-)
Serine protease DegP n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W27_COLP3
BD02T64_scaffold_562_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16017..17075
DNA (1059bp) protein (353aa)
degS; serine protease DegS (EC:3.4.21.-)
Serine protease DegS n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W26_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98975.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
BD02T64_scaffold_562_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17308..18573)
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=MURA_COLP3
BD02T64_scaffold_562_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18595..18852)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037231FB
Uncharacterized protein {ECO:0000313|EMBL:KGJ98973.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
BolA/YrbA family protein
BD02T64_scaffold_562_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18895..19200)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000378E266
Uncharacterized protein {ECO:0000313|EMBL:KGJ98972.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
STAS domain-containing protein
BD02T64_scaffold_562_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19203..19892)
DNA (690bp) protein (230aa)
Toluene tolerance family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VJ1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98971.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
toluene tolerance family protein
BD02T64_scaffold_562_23
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19924..20400)
DNA (477bp) protein (159aa)
ABC transporter substrate-binding protein n=1 Tax=Colwellia piezophila RepID=UPI00037A8A76
Uncharacterized protein {ECO:0000313|EMBL:KGJ98970.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
mce family protein
BD02T64_scaffold_562_24
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20447..21226)
DNA (780bp) protein (260aa)
Putative membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VI9_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98969.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_562_25
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21226..22029)
DNA (804bp) protein (268aa)
Polyamine-transporting ATPase {ECO:0000313|EMBL:KGJ98968.1}; EC=3.6.3.31 {ECO:0000313|EMBL:KGJ98968.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelli
ABC transporter, ATP-binding protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VI8_COLP3
ABC transporter ATP-binding protein
BD02T64_scaffold_562_26
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22543..23520
DNA (978bp) protein (326aa)
Putative sodium/calcium exchanger protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VI7_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98967.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
sodium/calcium exchanger protein
BD02T64_scaffold_562_27
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23535..24509
DNA (975bp) protein (325aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1535422 species="Bacteria; Proteobacter
D-arabinose 5-phosphate isomerase n=1 Tax=Colwellia piezophila RepID=UPI00036482A3
KpsF/GutQ family protein
BD02T64_scaffold_562_28
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24511..25080
DNA (570bp) protein (190aa)
3-deoxy-manno-octulosonate-8-phosphatase {ECO:0000313|EMBL:KGJ98965.1}; EC=3.1.3.45 {ECO:0000313|EMBL:KGJ98965.1};; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacte
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
Phosphatase, YrbI family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VI5_COLP3
BD02T64_scaffold_562_29
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25077..25643
DNA (567bp) protein (189aa)
Lipopolysaccharide export system protein LptC n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VI4_COLP3
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915, ECO:0000256|PIRNR:PIRNR028513}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria;
hypothetical protein
BD02T64_scaffold_562_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25609..26193
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000364E8CB
Uncharacterized protein {ECO:0000313|EMBL:KGJ98963.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
OstA family protein
Displaying items 1-30 of 57 in total

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