ggKbase home page

BD02T64_scaffold_802

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_802_1
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(833..3817)
DNA (2985bp) protein (995aa)
TonB-dependent receptor n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HXC8_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:ESP92604.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
TonB-dependent receptor
BD02T64_scaffold_802_2
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3944..6613)
DNA (2670bp) protein (890aa)
Glucan endo-1,3-beta-D-glucosidase n=3 Tax=Alteromonas macleodii RepID=S5B566_ALTMA
glucan endo-1,3-beta-D-glucosidase
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:AIG00366.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas a
BD02T64_scaffold_802_3
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7039..8472
DNA (1434bp) protein (478aa)
Glycoside hydrolase family 16 n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KJF7_SHEWM rbh
glycoside hydrolase rbh
Glycoside hydrolase family 16 {ECO:0000313|EMBL:ACA88629.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" sour
BD02T64_scaffold_802_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8557..12018
DNA (3462bp) protein (1154aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XT1_COLP3 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ28070.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_802_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12097..12984
DNA (888bp) protein (296aa)
glycosyl hydrolase n=1 Tax=Psychromonas ossibalaenae RepID=UPI0003825138 rbh
glycosyl hydrolase rbh
Putative glycosyl hydrolase {ECO:0000313|EMBL:AAZ25174.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
BD02T64_scaffold_802_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13094..14044
DNA (951bp) protein (317aa)
Putative glycosyl hydrolase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XT3_COLP3
glycosyl hydrolase
Putative glycosyl hydrolase {ECO:0000313|EMBL:AAZ25605.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
BD02T64_scaffold_802_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14149..15291
DNA (1143bp) protein (381aa)
Sensor histidine kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XT4_COLP3
sensor histidine kinase
Sensor histidine kinase {ECO:0000313|EMBL:AAZ26137.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_802_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15302..16135
DNA (834bp) protein (278aa)
Response regulator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XT5_COLP3 rbh
response regulator
Response regulator {ECO:0000313|EMBL:AAZ25601.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (s
BD02T64_scaffold_802_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16249..17484
DNA (1236bp) protein (412aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
hutI; imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=HUTI_COLP3
BD02T64_scaffold_802_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17663..18298
DNA (636bp) protein (212aa)
Lipoprotein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1MBI0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ87915.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
membrane protein
BD02T64_scaffold_802_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18358..18843)
DNA (486bp) protein (162aa)
Regulator of ribonuclease activity A n=1 Tax=Aeromonas diversa 2478-85 RepID=N9VJK2_9GAMM rbh
Regulator of ribonuclease activity A {ECO:0000256|HAMAP-Rule:MF_00471, ECO:0000256|SAAS:SAAS00043861}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliac
regulator of ribonuclease activity A
BD02T64_scaffold_802_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19039..19251)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RL31_COLP3
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalas
rpmE; 50S ribosomal protein L31
BD02T64_scaffold_802_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19485..21719
DNA (2235bp) protein (745aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1535422 species="Bacteria;
Primosomal protein N' n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W07_COLP3
priA; primosomal protein N'
BD02T64_scaffold_802_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21873..22445
DNA (573bp) protein (191aa)
Putative cell division protein FtsN n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W06_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK00795.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
cell division protein FtsN
BD02T64_scaffold_802_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22547..23065
DNA (519bp) protein (173aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1535422 speci
hslV; ATP-dependent protease peptidase subunit (EC:3.4.99.-)
ATP-dependent protease subunit HslV n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W04_COLP3
BD02T64_scaffold_802_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23115..24443
DNA (1329bp) protein (443aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=HSLU_COLP3
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1535422 species="Bacteria; Proteoba
hslU; ATP-dependent protease ATP-binding subunit HslU
BD02T64_scaffold_802_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24485..24862
DNA (378bp) protein (126aa)
Conserved domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W02_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK00798.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_802_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24884..25363
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FD13_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGK00799.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
putative uncharacterized protein
BD02T64_scaffold_802_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25410..25790
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JC29_NITOC rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK00800.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_802_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25969..26559
DNA (591bp) protein (197aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W09_COLP3
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotale
ECF subfamily RNA polymerase sigma factor
BD02T64_scaffold_802_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26549..27064
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47W10_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK00802.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_802_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27138..28103
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2L1K3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK00803.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_802_23
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28437..30371
DNA (1935bp) protein (645aa)
PrkA family serine protein kinase n=1 Tax=Colwellia piezophila RepID=UPI000375D9FB
Putative serine protein kinase, PrkA {ECO:0000313|EMBL:KGK00804.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thala
hypothetical protein
BD02T64_scaffold_802_24
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30390..31670
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Pseudoalteromonas ruthenica RepID=UPI000349AA09
UPF0229 protein ND16A_3276 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotal
hypothetical protein
BD02T64_scaffold_802_25
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31672..33225
DNA (1554bp) protein (518aa)
SpoVR like family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YF9_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK00806.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
SpoVR family protein
BD02T64_scaffold_802_26
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33435..34874
DNA (1440bp) protein (480aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
DNA helicase n=1 Tax=Colwellia piezophila RepID=UPI0003655E1F
Uncharacterized protein {ECO:0000313|EMBL:KGK00807.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
BD02T64_scaffold_802_27
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35033..35278
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ88440.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
BD02T64_scaffold_802_28
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35339..35773)
DNA (435bp) protein (145aa)
Zinc uptake regulation protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q489U4_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88439.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
zur; zinc uptake regulation protein
BD02T64_scaffold_802_29
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35956..36942
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwel
tRNA-dihydrouridine synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A03_COLP3
tRNA-dihydrouridine synthase A
BD02T64_scaffold_802_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37202..37333
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ88437.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
Displaying items 1-30 of 38 in total

View Taxonomy