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BD02T64_scaffold_870

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_870_1
unknown

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2..85
DNA (84bp) protein (28aa)

This feature has no annotations

BD02T64_scaffold_870_2
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(299..2209)
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000381FF01
Uncharacterized protein {ECO:0000313|EMBL:KGJ98790.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
soluble lytic murein transglycosylase
BD02T64_scaffold_870_3
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2299..2544
DNA (246bp) protein (82aa)
Sulfurtransferase TusA homolog {ECO:0000256|HAMAP-Rule:MF_00413}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00413};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
Sulfurtransferase TusA homolog n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=TUSA_COLP3
sirA; sirA protein
BD02T64_scaffold_870_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2617..3120)
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ88222.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
transposase IS116/IS110/IS902 family protein id=5094332 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
transposase
BD02T64_scaffold_870_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3562..5628)
DNA (2067bp) protein (689aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYGB_COLP3
BD02T64_scaffold_870_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5629..6549)
DNA (921bp) protein (307aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
glycyl-tRNA synthetase n=1 Tax=Colwellia piezophila RepID=UPI00036BDAAD
BD02T64_scaffold_870_7
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6715..7458)
DNA (744bp) protein (248aa)
Putative transposase n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YYI8_PHOPR rbh
Putative transposase {ECO:0000313|EMBL:EAS41334.1}; TaxID=314280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum 3
transposase IS4 family protein
BD02T64_scaffold_870_8
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7544..7831)
DNA (288bp) protein (96aa)
hypothetical protein, partial n=1 Tax=Vibrio crassostreae RepID=UPI0003696A60 rbh
Putative transposase {ECO:0000313|EMBL:EAS41334.1}; TaxID=314280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum 3
transposase
BD02T64_scaffold_870_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8230..10665)
DNA (2436bp) protein (812aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1535422 species="Bacteria; P
gyrB; DNA gyrase, B subunit (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Colwellia piezophila RepID=UPI000368CB6E
BD02T64_scaffold_870_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10665..11759)
DNA (1095bp) protein (365aa)
DNA repair protein RecF n=1 Tax=Colwellia piezophila RepID=UPI00036D3B3C
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwell
recF; DNA replication and repair protein RecF
BD02T64_scaffold_870_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11769..12872)
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1535422 species="Bacte
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AS6_COLP3
BD02T64_scaffold_870_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12889..14262)
DNA (1374bp) protein (458aa)
chromosomal replication initiation protein n=1 Tax=Colwellia piezophila RepID=UPI00035FD87A
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
dnaA; chromosomal replication initiator protein DnaA
BD02T64_scaffold_870_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14841..14975
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RL34_COLP3
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalas
rpmH; 50S ribosomal protein L34
BD02T64_scaffold_870_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15007..15363
DNA (357bp) protein (119aa)
rnpA; ribonuclease P protein component (EC:3.1.26.5)
ribonuclease P n=1 Tax=Colwellia piezophila RepID=UPI00037D3C63
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
BD02T64_scaffold_870_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15330..15578
DNA (249bp) protein (83aa)
membrane protein insertion efficiency factor n=1 Tax=Colwellia piezophila RepID=UPI00036422BB
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromona
hypothetical protein
BD02T64_scaffold_870_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15585..17243
DNA (1659bp) protein (553aa)
Membrane protein insertase YidC n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47U35_COLP3
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
inner membrane protein, 60 kDa
BD02T64_scaffold_870_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17467..18852
DNA (1386bp) protein (462aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; C
tRNA modification GTPase TrmE n=1 Tax=Colwellia piezophila RepID=UPI0003764B26
trmE; tRNA modification GTPase TrmE
BD02T64_scaffold_870_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19053..19508
DNA (456bp) protein (152aa)
MioC protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47U37_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98777.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
mioC; mioC protein
BD02T64_scaffold_870_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19908..21797
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=MNMG_COLP3
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1535422 species="Bacte
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
BD02T64_scaffold_870_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21987..22613
DNA (627bp) protein (209aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RSMG_COLP3
gidB; 16S rRNA methyltransferase GidB
BD02T64_scaffold_870_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22792..23583
DNA (792bp) protein (264aa)
ParA family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47U40_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98774.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
parA family protein
BD02T64_scaffold_870_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23601..24488
DNA (888bp) protein (296aa)
ParB-like partition protein n=1 Tax=Rheinheimera sp. A13L RepID=F7NQN7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ98773.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
chromosome partitioning protein ParB
BD02T64_scaffold_870_23
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24680..25075
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000363C3E3
Uncharacterized protein {ECO:0000313|EMBL:KGJ96834.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
atpI; ATP synthase protein I
BD02T64_scaffold_870_24
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25088..25879
DNA (792bp) protein (264aa)
atpB; ATP synthase F0F1 subunit A (EC:3.6.3.14)
F0F1 ATP synthase subunit A n=1 Tax=Algicola sagamiensis RepID=UPI00037605F3
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
BD02T64_scaffold_870_25
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26028..26243
DNA (216bp) protein (72aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14)
F0F1 ATP synthase subunit C n=12 Tax=Alteromonas RepID=F2GCN2_ALTMD rbh
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source
BD02T64_scaffold_870_26
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26301..26771
DNA (471bp) protein (157aa)
atpF; ATP synthase F0 subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=ATPF_COLP3
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
BD02T64_scaffold_870_27
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26784..27317
DNA (534bp) protein (178aa)
atpH; ATP synthase F1 subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Colwellia maris RepID=Q8VV80_COLMA
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
BD02T64_scaffold_870_28
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27332..28873
DNA (1542bp) protein (514aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
atpA; ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Colwellia maris RepID=Q8VV79_COLMA
BD02T64_scaffold_870_29
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28898..29758
DNA (861bp) protein (287aa)
atpG; ATP synthase F0F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=ATPG_COLP3
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1535
BD02T64_scaffold_870_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29793..31178
DNA (1386bp) protein (462aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Colwellia maris RepID=Q8VV77_COLMA
Displaying items 1-30 of 40 in total

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