ggKbase home page

BD02T64_scaffold_884

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_884_1
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..213
DNA (213bp) protein (71aa)
Transposase n=1 Tax=Pseudoalteromonas sp. BSi20652 RepID=G7EDL7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGJ86455.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_884_2
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

640..1191
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Pseudoalteromonas flavipulchra RepID=UPI00029A1187
Uncharacterized protein {ECO:0000313|EMBL:KGJ89313.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
lipoprotein
BD02T64_scaffold_884_3
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1288..1806
DNA (519bp) protein (173aa)
Putative lipoprotein n=1 Tax=Pseudoalteromonas luteoviolacea B = ATCC 29581 RepID=L8D4N7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGJ89328.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
lipoprotein
BD02T64_scaffold_884_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1936..2298
DNA (363bp) protein (121aa)
ArsR family transcriptional regulator n=1 Tax=Pseudomonas pelagia RepID=UPI0003A86D33
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:KGJ89329.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" so
regulatory protein ArsR
BD02T64_scaffold_884_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2312..3316
DNA (1005bp) protein (335aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonad
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KMJ8_SIMAS
BD02T64_scaffold_884_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3344..4576
DNA (1233bp) protein (411aa)
Permease n=1 Tax=Cellvibrio sp. BR RepID=I3IEE1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGJ89331.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
major facilitator transporter
BD02T64_scaffold_884_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4582..5010
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00036AD8A8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ89332.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_884_8
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5118..7382
DNA (2265bp) protein (755aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1535422 species="Ba
parC; DNA topoisomerase IV subunit A (EC:5.99.1.-)
DNA topoisomerase 4 subunit A n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WK0_COLP3
BD02T64_scaffold_884_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7898..8581
DNA (684bp) protein (228aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alte
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q487K0_COLP3
BD02T64_scaffold_884_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8582..8965
DNA (384bp) protein (128aa)
Regulator of ribonuclease activity B n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RRAB_COLP3
Regulator of ribonuclease activity B {ECO:0000256|HAMAP-Rule:MF_01888}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="T
hypothetical protein
BD02T64_scaffold_884_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9001..10131)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Vibrio breoganii RepID=UPI000314A574 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ89337.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_884_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10256..13111)
DNA (2856bp) protein (952aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYV_COLP3
BD02T64_scaffold_884_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13166..13687)
DNA (522bp) protein (174aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:KGJ89339.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KGJ89339.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliace
holC; DNA polymerase III, chi subunit (EC:2.7.7.7)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0002F0D080
BD02T64_scaffold_884_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13694..15199)
DNA (1506bp) protein (502aa)
pepA; leucyl aminopeptidase (EC:3.4.11.1)
multifunctional aminopeptidase A n=1 Tax=Colwellia piezophila RepID=UPI00036EEEF4
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1535422 spec
BD02T64_scaffold_884_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15473..16582
DNA (1110bp) protein (370aa)
permease n=1 Tax=Colwellia piezophila RepID=UPI0003688A99
Uncharacterized protein {ECO:0000313|EMBL:KGJ89341.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
permease
BD02T64_scaffold_884_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16582..17646
DNA (1065bp) protein (355aa)
Putative permease n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488M1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ89342.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
permease
BD02T64_scaffold_884_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17824..18324)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488M0_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ89343.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_884_18
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18493..18957
DNA (465bp) protein (155aa)
S-isoprenylcysteine methyltransferase-like protein n=1 Tax=Alishewanella aestuarii B11 RepID=J1QNC4_9ALTE rbh
S-isoprenylcysteine methyltransferase-like protein {ECO:0000313|EMBL:EJI87121.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella
Isoprenylcysteine carboxyl methyltransferase
BD02T64_scaffold_884_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18992..19609
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ89344.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
BD02T64_scaffold_884_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19622..20581)
DNA (960bp) protein (320aa)
Acid phosphatase n=1 Tax=Vibrio brasiliensis LMG 20546 RepID=E8LYV6_9VIBR rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ89345.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
phosphohydrolase
BD02T64_scaffold_884_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20676..22040)
DNA (1365bp) protein (455aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WC8_COLP3
BD02T64_scaffold_884_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22186..23655
DNA (1470bp) protein (490aa)
guaB; inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M9A6_9GAMM rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
BD02T64_scaffold_884_23
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23851..25428
DNA (1578bp) protein (526aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase n=1 Tax=Colwellia piezophila RepID=UPI0003788852
BD02T64_scaffold_884_24
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25679..26122)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ89351.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
BD02T64_scaffold_884_25
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26316..26888
DNA (573bp) protein (191aa)
Glutathione S-transferase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=R9S5P8_SIMAS
Uncharacterized protein {ECO:0000313|EMBL:KGJ89352.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
glutathione S-transferase
BD02T64_scaffold_884_26
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26968..27285
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WM8_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ89353.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_884_27
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27752..27970)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037170CD
EF hand domain-containing protein {ECO:0000313|EMBL:KGJ89355.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalasso
EF hand domain-containing protein
BD02T64_scaffold_884_28
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28084..30192)
DNA (2109bp) protein (703aa)
Sodium:dicarboxylate symporter family protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YRX3_OLEAN
Uncharacterized protein {ECO:0000313|EMBL:KGJ89356.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
sodium/dicarboxylate symporter family protein rbh
BD02T64_scaffold_884_29
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30399..31049
DNA (651bp) protein (217aa)
Diguanylate cyclase n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SPY5_FERBD
Putative diguanylate cyclase {ECO:0000313|EMBL:KGJ89357.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea
diguanylate cyclase
BD02T64_scaffold_884_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31021..31713
DNA (693bp) protein (231aa)
Diguanylate cyclase n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q084B9_SHEFN
Putative diguanylate cyclase {ECO:0000313|EMBL:KGJ89357.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea
diguanylate cyclase
Displaying items 1-30 of 38 in total

View Taxonomy