ggKbase home page

BD02T64_scaffold_2061

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2061_1
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1359
DNA (1359bp) protein (453aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000
Xaa-Pro dipeptidase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CDH4_9GAMM
proline dipeptidase
BD02T64_scaffold_2061_2
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1385..2011
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AT4_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98792.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_2061_3
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2089..3540
DNA (1452bp) protein (484aa)
potassium transporter n=1 Tax=Colwellia piezophila RepID=UPI00036F215C
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thal
trkH; Trk system potassium uptake protein TrkH
BD02T64_scaffold_2061_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3719..5101)
DNA (1383bp) protein (461aa)
Trk system potassium uptake protein TrkA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AT1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88223.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
trkA; potassium transporter peripheral membrane component
BD02T64_scaffold_2061_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5196..6491)
DNA (1296bp) protein (432aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alte
sun; sun protein (EC:2.1.1.-)
16S rRNA methyltransferase n=1 Tax=Colwellia piezophila RepID=UPI0003719CF9
BD02T64_scaffold_2061_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6491..7483)
DNA (993bp) protein (331aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1535422 species="
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Francisella novicida RepID=D7QYF8_FRANO
BD02T64_scaffold_2061_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7505..8017)
DNA (513bp) protein (171aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase n=1 Tax=Pseudoalteromonas ruthenica RepID=UPI0003491AFC
peptide deformylase
BD02T64_scaffold_2061_8
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8169..9260
DNA (1092bp) protein (364aa)
LysM domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AU7_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88227.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
LysM domain-containing protein
BD02T64_scaffold_2061_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9368..10483
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037E435D
Uncharacterized protein {ECO:0000313|EMBL:KGJ88228.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
DNA processing protein DprA
BD02T64_scaffold_2061_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10529..11002
DNA (474bp) protein (158aa)
Protein Smg homolog n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SMG_COLP3
Protein Smg homolog {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
smg; smg protein
BD02T64_scaffold_2061_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11047..11610
DNA (564bp) protein (188aa)
Topoisomerase DNA-binding C4 zinc finger domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AU4_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88230.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
topoisomerase DNA-binding C4 zinc finger domain-containing protein
BD02T64_scaffold_2061_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11726..12229
DNA (504bp) protein (168aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Psychromonas hadalis RepID=UPI0003B32840
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
BD02T64_scaffold_2061_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12374..14020
DNA (1647bp) protein (549aa)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:KGJ88233.1}; EC=6.2.1.26 {ECO:0000313|EMBL:KGJ88233.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwell
putative fatty-acid--CoA ligase (EC:6.2.1.-)
acyl-CoA synthetase n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036B8C41
BD02T64_scaffold_2061_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14166..14750
DNA (585bp) protein (195aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852,
Threonylcarbamoyl-AMP synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=TSAC_COLP3
RNA-binding protein
BD02T64_scaffold_2061_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14747..15655
DNA (909bp) protein (303aa)
hemF; coproporphyrinogen III oxidase (EC:1.3.3.3)
coproporphyrinogen III oxidase n=1 Tax=Catenovulum agarivorans RepID=UPI0002D8B213 rbh
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
BD02T64_scaffold_2061_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15776..17608)
DNA (1833bp) protein (611aa)
Membrane associated sulfatase n=1 Tax=Psychromonas sp. CNPT3 RepID=M4U2G2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ88236.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
membrane associated sulfatase
BD02T64_scaffold_2061_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17734..18438
DNA (705bp) protein (235aa)
Outer membrane protein, OmpW family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AV6_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88237.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
OmpW family outer membrane protein
BD02T64_scaffold_2061_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18572..19387
DNA (816bp) protein (272aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=AROE_COLP3
BD02T64_scaffold_2061_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19444..19659
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ88239.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
BD02T64_scaffold_2061_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19876..20436)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003809806
Uncharacterized protein {ECO:0000313|EMBL:KGJ88240.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
transferase hexapeptide domain-containing protein
Displaying 20 items

View Taxonomy