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BD02T64_scaffold_2188

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2188_1
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

393..1199
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI000360437F rbh
Uncharacterized protein {ECO:0000313|EMBL:KDM90263.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotole
hypothetical protein
BD02T64_scaffold_2188_2
unknown

Not on your lists

comp(1162..1398)
DNA (237bp) protein (79aa)

This feature has no annotations

BD02T64_scaffold_2188_3
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1702..2226)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X07_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ94778.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_2188_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2283..2894)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X07_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ94778.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_2188_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3252..4508
DNA (1257bp) protein (419aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA1; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase 1 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=GLYA1_COLP3
BD02T64_scaffold_2188_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4839..5294
DNA (456bp) protein (152aa)
Transcriptional repressor NrdR n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E2J2_9GAMM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; T
nrdR; transcriptional regulator NrdR
BD02T64_scaffold_2188_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5345..6502
DNA (1158bp) protein (386aa)
ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KKZ0_9GAMM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Tha
BD02T64_scaffold_2188_8
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6507..7172
DNA (666bp) protein (222aa)
Riboflavin synthase {ECO:0000313|EMBL:KGK01058.1}; EC=2.5.1.9 {ECO:0000313|EMBL:KGK01058.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thal
ribE1; riboflavin synthase subunit alpha (EC:2.5.1.9)
riboflavin synthase subunit alpha n=1 Tax=Colwellia piezophila RepID=UPI0003783B49
BD02T64_scaffold_2188_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7186..8295
DNA (1110bp) protein (370aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=1535422
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Colwellia piezophila RepID=UPI000361F17E
ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase
BD02T64_scaffold_2188_10
unknown

Not on your lists

comp(8572..8991)
DNA (420bp) protein (140aa)

This feature has no annotations

BD02T64_scaffold_2188_11
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9654..10100
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NU63_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHQ57383.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
hypothetical protein
BD02T64_scaffold_2188_12
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10429..11052
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000372EBC1 rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EET47980.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" so
BD02T64_scaffold_2188_13
Paraglaciecola mesophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11411..12346)
DNA (936bp) protein (312aa)
Inner membrane protein yedI n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6XSQ5_9ALTE
Inner membrane protein yedI {ECO:0000313|EMBL:GAC23654.1}; TaxID=1128912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglacie
hypothetical protein
BD02T64_scaffold_2188_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12457..14319)
DNA (1863bp) protein (621aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Colwellia piezophila RepID=UPI00037A2CDA
BD02T64_scaffold_2188_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14332..15222)
DNA (891bp) protein (297aa)
Geranyltranstransferase {ECO:0000313|EMBL:KGK01037.1}; EC=2.5.1.10 {ECO:0000313|EMBL:KGK01037.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
ispA; geranyltranstransferase (EC:2.5.1.10)
geranyltranstransferase n=1 Tax=Colwellia piezophila RepID=UPI00036DF60F
BD02T64_scaffold_2188_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15222..15464)
DNA (243bp) protein (81aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
exodeoxyribonuclease VII small subunit n=1 Tax=Colwellia piezophila RepID=UPI00037C0850
BD02T64_scaffold_2188_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15678..17141
DNA (1464bp) protein (488aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00022963}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfu
tRNA sulfurtransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=THII_COLP3
thiI; thiamine biosynthesis protein ThiI
BD02T64_scaffold_2188_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17278..18930)
DNA (1653bp) protein (551aa)
Peptidase family M49 n=1 Tax=Colwellia piezophila RepID=UPI0003761C9B
Uncharacterized protein {ECO:0000313|EMBL:KGK01034.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_2188_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19176..19673
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036352BD
Uncharacterized protein {ECO:0000313|EMBL:KGK01033.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
ACT domain-containing protein
BD02T64_scaffold_2188_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19699..21432)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036071A8
Uncharacterized protein {ECO:0000313|EMBL:KGK01032.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
Na+/H+ antiporter NhaC
BD02T64_scaffold_2188_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21653..22645)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L0D0_9GAMM
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:KGJ93974.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliacea
hypothetical protein
BD02T64_scaffold_2188_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22642..23856)
DNA (1215bp) protein (405aa)
Carbon-nitrogen hydrolase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6A0_9RHOB
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:KGJ93973.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colw
hydrolase
BD02T64_scaffold_2188_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24520..24948
DNA (429bp) protein (143aa)
Arginine decarboxylase {ECO:0000313|EMBL:KGJ93972.1}; EC=4.1.1.19 {ECO:0000313|EMBL:KGJ93972.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
ornithine decarboxylase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289101D
ornithine decarboxylase
BD02T64_scaffold_2188_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24964..25977
DNA (1014bp) protein (338aa)
Arginine decarboxylase {ECO:0000313|EMBL:KGJ93972.1}; EC=4.1.1.19 {ECO:0000313|EMBL:KGJ93972.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
ornithine decarboxylase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289101D
ornithine decarboxylase
BD02T64_scaffold_2188_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25964..26704
DNA (741bp) protein (247aa)
Arginine decarboxylase {ECO:0000313|EMBL:KGJ93972.1}; EC=4.1.1.19 {ECO:0000313|EMBL:KGJ93972.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003708366
ornithine decarboxylase
BD02T64_scaffold_2188_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26788..27210
DNA (423bp) protein (141aa)
Arginine decarboxylase {ECO:0000313|EMBL:KGJ93972.1}; EC=4.1.1.19 {ECO:0000313|EMBL:KGJ93972.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
Lysine decarboxylase (EC:4.1.1.18)
Ornithine decarboxylase n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KGQ4_9GAMM
BD02T64_scaffold_2188_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27523..28968
DNA (1446bp) protein (482aa)
biotin carboxylase-like protein (EC:6.4.1.2)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00037433A7
Uncharacterized protein {ECO:0000313|EMBL:KGJ93971.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
BD02T64_scaffold_2188_28
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29226..30317)
DNA (1092bp) protein (364aa)
Glutamine ABC transporter periplasmic glutamine-binding protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EA16_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KIH76179.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibac
polar amino acid transport system substrate-binding protein
BD02T64_scaffold_2188_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30332..31606)
DNA (1275bp) protein (425aa)
Sodium/glutamate symporter n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480V8_COLP3
gltS; sodium/glutamate symporter
Sodium/glutamate symporter {ECO:0000313|EMBL:AAZ27585.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryt
BD02T64_scaffold_2188_30
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31697..32974)
DNA (1278bp) protein (426aa)
Orn/DAP/Arg decarboxylase, family 2 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480V9_COLP3
Orn/DAP/Arg decarboxylase
Orn/DAP/Arg decarboxylase, family 2 {ECO:0000313|EMBL:AAZ27133.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia p
Displaying items 1-30 of 36 in total

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