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BD02T64_scaffold_4376

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_4376_1
unknown

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21..299
DNA (279bp) protein (93aa)

This feature has no annotations

BD02T64_scaffold_4376_2
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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289..2682
DNA (2394bp) protein (798aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1535422 species="Bacteria; Proteobacteria; Gam
rnr; ribonuclease R (EC:3.1.-.-)
ribonuclease R n=1 Tax=Colwellia piezophila RepID=UPI0003671A07
BD02T64_scaffold_4376_3
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2694..3449
DNA (756bp) protein (252aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VA9_COLP3
23S rRNA (guanosine-2'-O-)-methyltransferase
BD02T64_scaffold_4376_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3611..4039
DNA (429bp) protein (143aa)
30S ribosomal protein S6 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RS6_COLP3
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalass
rpsF; 30S ribosomal protein S6
BD02T64_scaffold_4376_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4064..4354
DNA (291bp) protein (97aa)
primosomal replication protein N n=1 Tax=Colwellia piezophila RepID=UPI000364CFA2
Primosomal replication protein n {ECO:0000256|HAMAP-Rule:MF_00720, ECO:0000256|SAAS:SAAS00194886}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
priB; primosomal replication protein N
BD02T64_scaffold_4376_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4417..4644
DNA (228bp) protein (76aa)
30S ribosomal protein S18 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RS18_COLP3
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotale
rpsR; 30S ribosomal protein S18
BD02T64_scaffold_4376_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4662..5114
DNA (453bp) protein (151aa)
50S ribosomal protein L9 n=1 Tax=Colwellia piezophila RepID=UPI0003780600
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea
rplI; 50S ribosomal protein L9
BD02T64_scaffold_4376_8
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5232..6140)
DNA (909bp) protein (303aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|SAAS:SAAS00086421}; EC=4.3.3.7 {ECO:0000256|SAAS:SAAS00086421};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromona
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthase n=1 Tax=Colwellia piezophila RepID=UPI000377A49B
BD02T64_scaffold_4376_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6355..7086
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Algicola sagamiensis RepID=UPI000375DA36 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ98933.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
TraT complement resistance family protein
BD02T64_scaffold_4376_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7105..7833
DNA (729bp) protein (243aa)
conjugal transfer protein TraT n=1 Tax=Pseudoalteromonas flavipulchra RepID=UPI00029AFBB9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ98934.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
traT; TraT complement resistance protein TraT
BD02T64_scaffold_4376_11
Vibrio tasmaniensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8112..8405)
DNA (294bp) protein (98aa)
hypothetical protein, partial n=1 Tax=Vibrio ordalii RepID=UPI00037512D6
putative uncharacterized (conserved) protein
Conserved protein {ECO:0000313|EMBL:CAV26125.1}; TaxID=575788 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tasmaniensis (strain LGP32) (V
BD02T64_scaffold_4376_12
unknown

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comp(8812..8976)
DNA (165bp) protein (55aa)

This feature has no annotations

BD02T64_scaffold_4376_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9167..10138)
DNA (972bp) protein (324aa)
Putative D-cysteine desulfhydrase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VE5_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ98935.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
D-cysteine desulfhydrase
Displaying 13 items

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