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BD02T64_scaffold_1027

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1027_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(870..1145)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037C75B7
Integrase family protein {ECO:0000313|EMBL:KGJ96193.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
integrase family protein
BD02T64_scaffold_1027_2
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1218..1448
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003626C2F
Tax=BJP_IG2069_Spirochaetales_48_31
BD02T64_scaffold_1027_3
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1472..2509
DNA (1038bp) protein (346aa)
Glutathione S-transferase family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YY2_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK00987.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
glutathione S-transferase YghU
BD02T64_scaffold_1027_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2623..3042)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003658062
Uncharacterized protein {ECO:0000313|EMBL:KGK00066.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1027_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3383..4801)
DNA (1419bp) protein (473aa)
D-stereospecific aminopeptidase {ECO:0000313|EMBL:KGK00079.1}; EC=3.4.11.19 {ECO:0000313|EMBL:KGK00079.1};; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alt
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI0003672293
D-stereospecific aminopeptidase
BD02T64_scaffold_1027_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4990..5775)
DNA (786bp) protein (262aa)
Alpha/beta hydrolase fold n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q082C2_SHEFN rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK00078.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
alpha/beta hydrolase
BD02T64_scaffold_1027_7
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5889..6263)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SX00_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGL54893.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga am
hypothetical protein
BD02T64_scaffold_1027_8
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8361..9305
DNA (945bp) protein (315aa)
Putative gluconeogenesis factor n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480H8_COLP3
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalas
hypothetical protein
BD02T64_scaffold_1027_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9378..9968)
DNA (591bp) protein (197aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1535422 species="
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
deoxycytidine triphosphate deaminase n=1 Tax=Catenovulum agarivorans RepID=UPI00030C8F18
BD02T64_scaffold_1027_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9997..11118)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000370C1BE
Uncharacterized protein {ECO:0000313|EMBL:KGK00074.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
mrp protein
BD02T64_scaffold_1027_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11243..13279
DNA (2037bp) protein (679aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYM_COLP3
BD02T64_scaffold_1027_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13415..13921)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036711A9
Uncharacterized protein {ECO:0000313|EMBL:KGK00072.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_1027_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14108..15751)
DNA (1644bp) protein (548aa)
Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase {ECO:0000313|EMBL:KGK00071.1}; EC=2.3.1.168 {ECO:0000313|EMBL:KGK00071.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacte
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component n=1 Tax=Rheinheimera sp. A13L RepID=F7NRU1_9GAMM rbh
dihydrolipoamide acetyltransferase
BD02T64_scaffold_1027_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15774..16751)
DNA (978bp) protein (326aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:KGK00070.1}; EC=1.2.4.4 {ECO:0000313|EMBL:KGK00070.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammap
2-oxoisovalerate dehydrogenase E1 component, beta subunit n=1 Tax=Glaciecola lipolytica E3 RepID=K6YDY6_9ALTE rbh
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit beta rbh
BD02T64_scaffold_1027_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16751..17935)
DNA (1185bp) protein (395aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:KGK00069.1}; EC=1.2.4.4 {ECO:0000313|EMBL:KGK00069.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammap
2-oxoisovalerate dehydrogenase complex, E1 component subunit alpha (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase n=1 Tax=Colwellia piezophila RepID=UPI000373E00D
BD02T64_scaffold_1027_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18184..19248)
DNA (1065bp) protein (355aa)
Succinylglutamate desuccinylase {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036677}; EC=3.5.1.96 {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036667};; TaxID=1535422 species="
hypothetical protein n=1 Tax=Algicola sagamiensis RepID=UPI00036C12BA
succinylglutamate desuccinylase
BD02T64_scaffold_1027_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19734..20357)
DNA (624bp) protein (208aa)
Non-ribosomal peptide synthetase n=1 Tax=Pseudoalteromonas piscicida JCM 20779 RepID=U1LLQ0_PSEO7
Uncharacterized protein {ECO:0000313|EMBL:KGK00065.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
D-alanyl-D-alanine carboxypeptidase
BD02T64_scaffold_1027_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20786..21037)
DNA (252bp) protein (84aa)
Putative beta-lactamase n=1 Tax=Algoriphagus machipongonensis RepID=A3HU16_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGK00064.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
D-alanyl-D-alanine carboxypeptidase
BD02T64_scaffold_1027_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21103..22023)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003640BBC
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="T
secF; preprotein translocase subunit SecF
BD02T64_scaffold_1027_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22020..22943)
DNA (924bp) protein (308aa)
Protein translocase subunit SecD n=1 Tax=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) RepID=Q15N36_PSEA6
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thala
secD; preprotein translocase subunit SecD
BD02T64_scaffold_1027_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23086..23667)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Gayadomonas joobiniege RepID=UPI00037E0A64
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thala
secD; preprotein translocase subunit SecD
BD02T64_scaffold_1027_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24060..24410)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003819323
Uncharacterized protein {ECO:0000313|EMBL:KGK00061.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
BD02T64_scaffold_1027_23
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24680..26326)
DNA (1647bp) protein (549aa)
Phosphoglucomutase {ECO:0000313|EMBL:KGK00060.1}; EC=5.4.2.2 {ECO:0000313|EMBL:KGK00060.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thala
pgm; phosphoglucomutase (EC:5.4.2.2)
phosphoglucomutase n=1 Tax=Colwellia piezophila RepID=UPI000362094C
BD02T64_scaffold_1027_24
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26380..26997)
DNA (618bp) protein (206aa)
Negative modulator of initiation of replication n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SEQA_COLP3
Negative modulator of initiation of replication {ECO:0000256|HAMAP-Rule:MF_00908, ECO:0000256|PIRNR:PIRNR019401}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
seqA; replication initiation regulator SeqA
BD02T64_scaffold_1027_25
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27254..28042
DNA (789bp) protein (263aa)
acyl-CoA esterase n=1 Tax=Colwellia piezophila RepID=UPI000371B2D8
Uncharacterized protein {ECO:0000313|EMBL:KGK00058.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
alpha/beta hydrolase
BD02T64_scaffold_1027_26
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28159..28380
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037DD4AF
Uncharacterized protein {ECO:0000313|EMBL:KGK00057.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1027_27
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28385..28663
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485E6_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK00056.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
LexA regulated protein
BD02T64_scaffold_1027_28
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28690..29217
DNA (528bp) protein (176aa)
Flavodoxin n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485E7_COLP3
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp. ND16A.;"
flavodoxin FldA
BD02T64_scaffold_1027_29
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29384..29830
DNA (447bp) protein (149aa)
ferric uptake regulator n=1 Tax=Colwellia piezophila RepID=UPI0003766AA8
Uncharacterized protein {ECO:0000313|EMBL:KGK00054.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
fur; ferric uptake regulator
BD02T64_scaffold_1027_30
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29895..31565)
DNA (1671bp) protein (557aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYQ_COLP3
Displaying items 1-30 of 35 in total

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