ggKbase home page

BD02T64_scaffold_1050

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1050_1
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..150
DNA (150bp) protein (50aa)
ISPpu13, transposase Orf2 n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5TD38_9ALTE
ISPpu13, transposase Orf2 {ECO:0000313|EMBL:GAB56215.1}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola punic
transposase IS66 family protein
BD02T64_scaffold_1050_2
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210..575)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Vibrio tubiashii RepID=F9T6P9_9VIBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW17525.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
BD02T64_scaffold_1050_3
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(602..907)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Vibrio tubiashii RepID=F9T6P9_9VIBR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW17525.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
BD02T64_scaffold_1050_4
Pseudoalteromonas sp. ND6B, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1065..1688
DNA (624bp) protein (208aa)
Serine recombinase n=3 Tax=Alteromonadales RepID=T2DM79_ALTMD rbh
serine recombinase rbh
Resolvase domain-containing protein {ECO:0000313|EMBL:KGK02656.1}; TaxID=1535421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" s
BD02T64_scaffold_1050_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1834..2910)
DNA (1077bp) protein (359aa)
Asparaginase {ECO:0000313|EMBL:KGJ88099.1}; EC=3.5.1.1 {ECO:0000313|EMBL:KGJ88099.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotal
asparaginase (EC:3.1.1.47 3.5.1.1)
L-asparaginase, putative n=1 Tax=Entamoeba dispar (strain ATCC PRA-260 / SAW760) RepID=B0EAS8_ENTDS
BD02T64_scaffold_1050_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3180..4664)
DNA (1485bp) protein (495aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
ketol-acid reductoisomerase n=1 Tax=Colwellia piezophila RepID=UPI000377C8FA
BD02T64_scaffold_1050_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4815..5699
DNA (885bp) protein (295aa)
Transcriptional regulator IlvY n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UP3_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88101.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
ilvY; DNA-binding transcriptional regulator IlvY
BD02T64_scaffold_1050_8
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5857..7668
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037AED50
Uncharacterized protein {ECO:0000313|EMBL:KJJ39893.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladiv
hypothetical protein
BD02T64_scaffold_1050_9
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7689..9221)
DNA (1533bp) protein (511aa)
competence protein ComM n=1 Tax=Colwellia piezophila RepID=UPI00036DEA9D
Uncharacterized protein {ECO:0000313|EMBL:KGJ88107.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
comM; competence protein ComM
BD02T64_scaffold_1050_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9593..11251
DNA (1659bp) protein (553aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae
ilvG; acetolactate synthase 2 catalytic subunit (EC:2.2.1.6)
acetolactate synthase n=1 Tax=Colwellia piezophila RepID=UPI0003796ADE
BD02T64_scaffold_1050_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11324..11581
DNA (258bp) protein (86aa)
ilvM; acetolactate synthase 2 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Rheinheimera sp. A13L RepID=F7NQY1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ88109.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
BD02T64_scaffold_1050_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11628..12554
DNA (927bp) protein (309aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:KGJ88110.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KGJ88110.1};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UN8_COLP3
BD02T64_scaffold_1050_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12607..14466
DNA (1860bp) protein (620aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=ILVD_COLP3
BD02T64_scaffold_1050_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14485..16056
DNA (1572bp) protein (524aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1535422 species="Bacteria; Proteobacte
ilvA; threonine ammonia-lyase, biosynthetic (EC:4.3.1.19)
Threonine ammonia-lyase, biosynthetic n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UN6_COLP3
BD02T64_scaffold_1050_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16187..16441)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A46_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88113.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1050_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16588..18612
DNA (2025bp) protein (675aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
rep; ATP-dependent DNA helicase Rep (EC:3.6.1.-)
ATP-dependent DNA helicase Rep n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A47_COLP3
BD02T64_scaffold_1050_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18638..19687)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CKB4_SHEPW rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ88115.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1050_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20481..22487)
DNA (2007bp) protein (669aa)
Intracellular signaling protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YFR8_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KGJ88117.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
diguanylate cyclase
BD02T64_scaffold_1050_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23341..23910
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003745310
Uncharacterized protein {ECO:0000313|EMBL:KGJ88118.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1050_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23919..24413
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000374A031
Uncharacterized protein {ECO:0000313|EMBL:KGJ88119.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_1050_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24432..24743
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Alishewanella RepID=H3ZIB6_9ALTE
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:KGJ88120.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source
DnaK suppressor protein
BD02T64_scaffold_1050_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24850..26220
DNA (1371bp) protein (457aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Co
Coproporphyrinogen-III oxidase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UR0_COLP3
hemN; coproporphyrinogen III oxidase
BD02T64_scaffold_1050_23
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26231..26767)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47V82_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ88122.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1050_24
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26834..28645)
DNA (1812bp) protein (604aa)
7TM domain sensor diguanylate cyclase n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KK06_SHEWM
Putative diguanylate cyclase {ECO:0000313|EMBL:KGJ88123.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea
sensor diguanylate cyclase
BD02T64_scaffold_1050_25
Shewanella halifaxensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29553..30794
DNA (1242bp) protein (414aa)
ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Shewanella halifaxensis (strain HAW-EB4) RepID=B0TKR6_SHEHH rbh
ATP-dependent OLD family endonuclease rbh
ATP-dependent endonuclease of the OLD family-like protein {ECO:0000313|EMBL:ABZ75868.1}; TaxID=458817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanell
BD02T64_scaffold_1050_26
Shewanella halifaxensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30787..31368
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Shewanella halifaxensis (strain HAW-EB4) RepID=B0TKR7_SHEHH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ75869.1}; TaxID=458817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella halifaxens
BD02T64_scaffold_1050_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31481..32671
DNA (1191bp) protein (397aa)
Phage integrase n=3 Tax=Enterobacteriaceae RepID=K3IQX4_ECOLX rbh
Integrase {ECO:0000313|EMBL:KHI26510.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative phage integrase
BD02T64_scaffold_1050_28
unknown

Not on your lists

32756..33106
DNA (351bp) protein (117aa)

This feature has no annotations

BD02T64_scaffold_1050_29
unknown

Not on your lists

33117..33221
DNA (105bp) protein (35aa)

This feature has no annotations

BD02T64_scaffold_1050_30
Vibrio shilonii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33237..33791
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Vibrio cyclitrophicus RepID=UPI0002D68384
Uncharacterized protein {ECO:0000313|EMBL:EDL51454.1}; TaxID=391591 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio shilonii AK1.;"
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy