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BD02T64_scaffold_1955

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1955_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ88336.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
BD02T64_scaffold_1955_2
Halomonas sp. TD01, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57..356)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. TD01 RepID=F7SS78_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP18349.1}; TaxID=999141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. TD01.;
BD02T64_scaffold_1955_3
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(479..781)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Salinimonas chungwhensis RepID=UPI000363985D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF98271.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas austra
BD02T64_scaffold_1955_4
unknown

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comp(1284..2546)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Vibrio splendidus RepID=UPI0002E5AF1A rbh
BD02T64_scaffold_1955_5
Psychromonas sp. CNPT3, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3001..3420)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=M4U5K2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH80866.1}; TaxID=314282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychromonas sp.
BD02T64_scaffold_1955_6
unknown

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3871..4014
DNA (144bp) protein (48aa)

This feature has no annotations

BD02T64_scaffold_1955_7
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4060..4539)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GQX6_METAL
Uncharacterized protein {ECO:0000313|EMBL:EIC28635.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrob
hypothetical protein
BD02T64_scaffold_1955_8
unknown

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comp(4530..5081)
DNA (552bp) protein (184aa)

This feature has no annotations

BD02T64_scaffold_1955_9
Vibrio splendidus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5310..5735)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Vibrio splendidus 12B01 RepID=A3UTJ3_VIBSP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAP94230.1}; TaxID=314291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio splendidus 12B01.;"
BD02T64_scaffold_1955_10
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5806..6336)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6W1_9GAMM rbh
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CED61888.1}; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella viscosa.;"
BD02T64_scaffold_1955_11
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6354..6743)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6W2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM69293.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
putative uncharacterized protein
BD02T64_scaffold_1955_12
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6845..8041)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6W3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM69294.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
putative phage integrase
BD02T64_scaffold_1955_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9399..10868)
DNA (1470bp) protein (490aa)
GTPase Der n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=DER_COLP3
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobac
engA; GTP-binding protein EngA
BD02T64_scaffold_1955_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11044..12270)
DNA (1227bp) protein (409aa)
Outer membrane protein assembly factor BamB n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WC3_COLP3
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
outer membrane protein assembly complex subunit YfgL
BD02T64_scaffold_1955_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12282..12914)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036BCDF4
Uncharacterized protein {ECO:0000313|EMBL:KGK00670.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1955_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12919..14199)
DNA (1281bp) protein (427aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYH_COLP3
BD02T64_scaffold_1955_17
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14329..15444)
DNA (1116bp) protein (372aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Colwellia piezophila RepID=UPI00037ECE69
BD02T64_scaffold_1955_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15546..16511)
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WB9_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGK00667.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1955_19
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16521..17912)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037DFA19
Uncharacterized protein {ECO:0000313|EMBL:KGK00666.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
lysM domain-containing protein
BD02T64_scaffold_1955_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18044..19171)
DNA (1128bp) protein (376aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RLMN_COLP3
ribosomal RNA large subunit methyltransferase N
BD02T64_scaffold_1955_21
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19387..19818)
DNA (432bp) protein (144aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
Nucleoside diphosphate kinase n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZTF7_9ALTE rbh
ndk; nucleoside diphosphate kinase
BD02T64_scaffold_1955_22
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19922..21547)
DNA (1626bp) protein (542aa)
NAD-dependent malic enzyme {ECO:0000256|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000256|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000256|HAMAP-Rule:MF_01619};; TaxID=1535422 species="Bacteria; Proteoba
malate dehydrogenase (EC:1.1.1.38)
NAD-dependent malic enzyme n=4 Tax=Alteromonas macleodii RepID=K7RP76_ALTMA
Displaying 22 items

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