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BD02T64_scaffold_1

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Displaying items 1-30 of 888 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1_1
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2766
DNA (2766bp) protein (922aa)
Cadherin domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5C3_9RHOB rbh
Cadherin domain protein {ECO:0000313|EMBL:EEE44441.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii
hemolysin-type calcium-binding region
BD02T64_scaffold_1_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2844..4283)
DNA (1440bp) protein (480aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSQ4_PARL1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:GAK43657.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
major facilitator superfamily transporter
BD02T64_scaffold_1_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4544..5296
DNA (753bp) protein (251aa)
Putative acyl-CoA thioesterase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R840_PHEZH rbh
Putative acyl-CoA thioesterase {ECO:0000313|EMBL:GAK46597.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
tesB2; acyl-CoA thioesterase
BD02T64_scaffold_1_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5372..8458)
DNA (3087bp) protein (1029aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
PAS sensor protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000378440A rbh
Histidine kinase {ECO:0000313|EMBL:EWY39842.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresi
BD02T64_scaffold_1_5
bacterium YEK0313, Bacteria

Not on your lists

8997..10526
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036EBCA9 rbh
Biofilm dispersion protein BdlA {ECO:0000313|EMBL:CEJ11831.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative Methyl-accepting chemotaxis protein with multiple PAS domains rbh
BD02T64_scaffold_1_6
unknown

Not on your lists

comp(10652..10942)
DNA (291bp) protein (97aa)

This feature has no annotations

BD02T64_scaffold_1_7
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11327..11704)
DNA (378bp) protein (126aa)
UPI0003CFC44E related cluster n=1 Tax=unknown RepID=UPI0003CFC44E rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ86298.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
hypothetical protein
BD02T64_scaffold_1_8
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11834..12526)
DNA (693bp) protein (231aa)
Putative aspartate racemase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZTZ7_PSEAC
Putative aspartate racemase {ECO:0000313|EMBL:GAD64557.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
aspartate racemase
BD02T64_scaffold_1_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12559..13467)
DNA (909bp) protein (303aa)
S-formylglutathione hydrolase (EC:3.1.2.12); K01070 S-formylglutathione hydrolase [EC:3.1.2.12] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
S-formylglutathione hydrolase (EC:3.1.2.12)
PREDICTED: S-formylglutathione hydrolase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14943 rbh
BD02T64_scaffold_1_10
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13430..14539)
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" sourc
alcohol dehydrogenase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039CC12B rbh
alcohol dehydrogenase
BD02T64_scaffold_1_11
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14642..15529)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00035C994E rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ64678.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantic
LysR family transcriptional regulator
BD02T64_scaffold_1_12
Hyphomonas sp. L-53-1-40, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15641..17137
DNA (1497bp) protein (499aa)
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Henriciella marina RepID=UPI00035D9FF6 rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KCZ66341.1}; TaxID=1207058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="H
methylmalonate-semialdehyde dehydrogenase
BD02T64_scaffold_1_13
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17176..17616
DNA (441bp) protein (147aa)
Putative transcriptional regulator, MerR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQA1_PARL1
MerR family transcriptional regulator
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:ABS62084.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="P
BD02T64_scaffold_1_14

Not on your lists

comp(17613..18968)
DNA (1356bp) protein (452aa)
hemN; Oxygen-independent coproporphyrinogen-III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen-III oxidase HemN n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY99_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN69545.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_1_15
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19117..19824
DNA (708bp) protein (236aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HA
molybdopterin-guanine dinucleotide biosynthesis protein MobA n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037AAEE1
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A
BD02T64_scaffold_1_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19849..20523
DNA (675bp) protein (225aa)
Response regulator receiver and ANTAR domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VK00_RHOPX rbh
response regulator receiver and ANTAR domain-containing protein
Response regulator receiver and ANTAR domain protein {ECO:0000313|EMBL:ADU43262.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomona
BD02T64_scaffold_1_17
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20520..21716
DNA (1197bp) protein (399aa)
Nitrate transport ATP-binding protein NrtC n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X6Z6_RHIFR rbh
nrtC; nitrate transport ATP-binding protein NrtC
Nitrate transport ATP-binding protein NrtC {ECO:0000313|EMBL:AFL51652.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
BD02T64_scaffold_1_18
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22005..23453
DNA (1449bp) protein (483aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWM7_9RHOB
ABC-type nitrate/sulfonate/bicarbonate transport systems {ECO:0000313|EMBL:EAV42948.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzi
nitrate/sulfonate/bicarbonate ABC transporter
BD02T64_scaffold_1_19
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23545..24624
DNA (1080bp) protein (360aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CJY3_9RHOB
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFO31169.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
binding-protein-dependent transport system inner membrane protein
BD02T64_scaffold_1_20
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24633..26366
DNA (1734bp) protein (578aa)
ATPase components of various ABC-type transport systems n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G443_9RHIZ rbh
ATPase components of various ABC-type transport systems {ECO:0000313|EMBL:EAU41638.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.
ATPase components of various ABC-type transport systems
BD02T64_scaffold_1_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26379..27629
DNA (1251bp) protein (417aa)
Assimilatory nitrate reductase (NADH) beta subunit {ECO:0000313|EMBL:ABD06463.1}; EC=1.7.1.1 {ECO:0000313|EMBL:ABD06463.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
Assimilatory nitrate reductase (NADH) beta subunit n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ97_RHOP2 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
BD02T64_scaffold_1_22
unknown

Not on your lists

27626..29446
DNA (1821bp) protein (607aa)
precorrin-3B synthase (EC:1.7.7.1)
Precorrin-3B synthase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A319_STAND rbh
Precorrin-3B synthase {ECO:0000313|EMBL:CPR17917.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.
BD02T64_scaffold_1_23
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29443..31059
DNA (1617bp) protein (539aa)
sulfite reductase (EC:1.8.1.2)
Sulfite reductase {ECO:0000313|EMBL:AHB47345.1}; EC=1.8.1.2 {ECO:0000313|EMBL:AHB47345.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphom
Sulfite reductase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBE4_9RHIZ rbh
BD02T64_scaffold_1_24
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31059..33773
DNA (2715bp) protein (905aa)
Molybdopterin oxidoreductase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7II96_XANP2 rbh
molybdopterin oxidoreductase
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ABS67739.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter aut
BD02T64_scaffold_1_25
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33867..34298
DNA (432bp) protein (144aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
Alkylhydroperoxidase AhpD n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PVF9_PSEUV rbh
Alkylhydroperoxidase AhpD
BD02T64_scaffold_1_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34300..35208
DNA (909bp) protein (303aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3Y2_9DELT rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EPX57886.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; C
ECF subfamily RNA polymerase sigma-24 subunit
BD02T64_scaffold_1_27
unknown

Not on your lists

35385..35897
DNA (513bp) protein (171aa)

This feature has no annotations

BD02T64_scaffold_1_28
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35949..36563
DNA (615bp) protein (205aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HMD0_9RHIZ rbh
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:KIV73675.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sourc
two component LuxR family transcriptional regulator
BD02T64_scaffold_1_29
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36584..38320)
DNA (1737bp) protein (579aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ70_PARL1 rbh
integral membrane sensor hybrid histidine kinase
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:ABS65203.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="
BD02T64_scaffold_1_30
unknown

Not on your lists

comp(38384..38803)
DNA (420bp) protein (140aa)

This feature has no annotations

Displaying items 1-30 of 888 in total

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