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BD02T64_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_175_1
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..317)
DNA (315bp) protein (105aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=467661 species="Bacteria; Proteobacteria; Alph
Ribonuclease R n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NLN1_9RHOB
ribonuclease R
BD02T64_scaffold_175_2
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(349..921)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDD6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ44163.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
hypothetical protein
BD02T64_scaffold_175_3
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(939..1364)
DNA (426bp) protein (142aa)
Acetyltransferase, gnat family n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CYM2_9RHOB rbh
Acetyltransferase, gnat family {ECO:0000313|EMBL:EEW58593.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter s
N-acetyltransferase GCN5
BD02T64_scaffold_175_4
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1361..2506)
DNA (1146bp) protein (382aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
UPI0003D6C544 related cluster n=1 Tax=unknown RepID=UPI0003D6C544 rbh
succinyl-diaminopimelate desuccinylase rbh
BD02T64_scaffold_175_5
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2829..4400
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDE2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ44160.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
hypothetical protein rbh
BD02T64_scaffold_175_6
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4405..5499
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0F027_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC21003.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein rbh
BD02T64_scaffold_175_7
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5575..6630
DNA (1056bp) protein (352aa)
UPI0003D6C81B related cluster n=1 Tax=unknown RepID=UPI0003D6C81B rbh
Glutamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC21058.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;
glutamine ABC transporter substrate-binding protein rbh
BD02T64_scaffold_175_8
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6648..7064)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ETS7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA17116.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
hypothetical protein
BD02T64_scaffold_175_9
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7152..8726
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDE7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ44156.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
hypothetical protein rbh
BD02T64_scaffold_175_10
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8743..9444)
DNA (702bp) protein (234aa)
HTH-type transcriptional regulator, GntR family n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7ESF6_PHAIB rbh
GntR family HTH-type transcriptional regulator rbh
HTH-type transcriptional regulator, GntR family {ECO:0000313|EMBL:AFO93268.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" so
BD02T64_scaffold_175_11
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9523..10056
DNA (534bp) protein (178aa)
UPI0003D6D305 related cluster n=1 Tax=unknown RepID=UPI0003D6D305 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC10397.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_175_12
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10053..11420)
DNA (1368bp) protein (456aa)
N-formimino-L-glutamate deiminase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0003063AF2 rbh
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:KIC21005.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisinge
N-formimino-L-glutamate deiminase rbh
BD02T64_scaffold_175_13
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11495..12709
DNA (1215bp) protein (405aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
imidazolonepropionase (EC:3.5.2.7) rbh
UPI0003D6C025 related cluster n=1 Tax=unknown RepID=UPI0003D6C025 rbh
BD02T64_scaffold_175_14
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12706..14229
DNA (1524bp) protein (508aa)
hutH; histidine ammonia-lyase HutH (EC:4.3.1.3) rbh
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
Histidine ammonia-lyase n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7EUF0_PHAG2 rbh
BD02T64_scaffold_175_15
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14226..15008
DNA (783bp) protein (261aa)
UPI0003D6AC73 related cluster n=1 Tax=unknown RepID=UPI0003D6AC73 rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KIC12699.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisinger
N-formylglutamate amidohydrolase rbh
BD02T64_scaffold_175_16
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15005..16672
DNA (1668bp) protein (556aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
hutU; urocanate hydratase HutU (EC:4.2.1.49) rbh
urocanate hydratase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002E73609
BD02T64_scaffold_175_17
Loktanella sp. S4079, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16821..17648)
DNA (828bp) protein (276aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAA
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CU32_9RHOB rbh
BD02T64_scaffold_175_18
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17800..18399)
DNA (600bp) protein (200aa)
Transcriptional regulator, GntR family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BF37_9RHOB rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDZ47870.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
GntR family transcriptional regulator rbh
BD02T64_scaffold_175_19
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18438..19358)
DNA (921bp) protein (307aa)
Threonine dehydratase {ECO:0000313|EMBL:KID07341.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KID07341.1};; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
threonine dehydratase (EC:4.3.1.19) rbh
threonine dehydratase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F8BE70 rbh
BD02T64_scaffold_175_20
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19433..20281
DNA (849bp) protein (283aa)
UPI0003D6A9D0 related cluster n=1 Tax=unknown RepID=UPI0003D6A9D0 rbh
lysine decarboxylase rbh
Lysine decarboxylase {ECO:0000313|EMBL:AHD02780.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohali
BD02T64_scaffold_175_21
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20324..20533)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LN69_RUEPO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV96571.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
BD02T64_scaffold_175_22
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20714..21901)
DNA (1188bp) protein (396aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849, ECO:0000256|SAAS:SAAS00181427};; 23S rRNA (adenine(2503)-C(2))-methyltrans
23S rRNA -methyltransferase (EC:2.1.1.192)
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Roseobacter sp. MED193 RepID=A3XDF0_9RHOB rbh
BD02T64_scaffold_175_23
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21994..22383)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BF30_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KHQ51193.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. U
hypothetical protein
BD02T64_scaffold_175_24
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22491..23027)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ETT6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA17125.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
hypothetical protein
BD02T64_scaffold_175_25
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23199..24197
DNA (999bp) protein (333aa)
asparaginase (EC:3.5.1.1) rbh
L-asparaginase, thermolabile family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BF28_9RHOB rbh
L-asparaginase, thermolabile family {ECO:0000313|EMBL:EDZ46373.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
BD02T64_scaffold_175_26
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24267..24581)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7ERV6_PHAG2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO89397.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallae
BD02T64_scaffold_175_27
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24621..25049)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI000237B538 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC40675.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;
hypothetical protein
BD02T64_scaffold_175_28
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25046..25318)
DNA (273bp) protein (91aa)
UPI0003D6CEA9 related cluster n=1 Tax=unknown RepID=UPI0003D6CEA9 rbh
transcriptional regulator, ArsR family
Uncharacterized protein {ECO:0000313|EMBL:AHD11397.1}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter galla
BD02T64_scaffold_175_29
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25451..26209)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ETW1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA17150.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
putative permease rbh
BD02T64_scaffold_175_30
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26213..27088)
DNA (876bp) protein (292aa)
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:EEB72173.1}; EC=3.1.3.3 {ECO:0000313|EMBL:EEB72173.1};; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobact
Phosphoserine phosphatase SerB n=1 Tax=Ruegeria sp. R11 RepID=B7QUN5_9RHOB rbh
phosphoserine phosphatase rbh
Displaying items 1-30 of 96 in total

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