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BD02T64_scaffold_328

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_328_1
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2..349)
DNA (348bp) protein (116aa)
30S ribosomal protein S16 n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=RS16_ROSDO
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera s
rpsP; 30S ribosomal protein S16
BD02T64_scaffold_328_2
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(446..742)
DNA (297bp) protein (99aa)
Chorismate mutase {ECO:0000313|EMBL:EEB83410.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EEB83410.1};; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ros
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJU7_9RHOB
BD02T64_scaffold_328_3
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(735..1340)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GDC9_RUEST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF65337.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (strain
BD02T64_scaffold_328_4
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1337..1876)
DNA (540bp) protein (180aa)
Acetyltransferase, GNAT family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNF8_RUEPO rbh
acetyltransferase, GNAT family rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:AAV96482.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomer
BD02T64_scaffold_328_5
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1876..2214)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EZY9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KAJ04547.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter med
hypothetical protein
BD02T64_scaffold_328_6
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2211..3710)
DNA (1500bp) protein (500aa)
UPI0003D6D771 related cluster n=1 Tax=unknown RepID=UPI0003D6D771
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
signal recognition particle
BD02T64_scaffold_328_7
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3873..4373)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI0002379FBB rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC15408.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
BD02T64_scaffold_328_8
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4435..4812)
DNA (378bp) protein (126aa)
glyoxalase n=1 Tax=Loktanella vestfoldensis RepID=UPI00036FF7EF rbh
Glyoxalase-like domain protein
Uncharacterized protein {ECO:0000313|EMBL:AHD10404.1}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter galla
BD02T64_scaffold_328_9
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4852..5394
DNA (543bp) protein (181aa)
transcriptional regulator n=1 Tax=Loktanella vestfoldensis RepID=UPI00035C4CD6 rbh
Transcriptional regulator {ECO:0000313|EMBL:KID08107.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. A
hypothetical protein
BD02T64_scaffold_328_10
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5883..7805
DNA (1923bp) protein (641aa)
UPI0003D6B2E7 related cluster n=1 Tax=unknown RepID=UPI0003D6B2E7 rbh
elongation factor G rbh
Elongation factor G {ECO:0000313|EMBL:AHC99382.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalid
BD02T64_scaffold_328_11
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7940..8467
DNA (528bp) protein (176aa)
YbaK/prolyl-tRNA synthetase domain protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CVC0_9RHOB rbh
YbaK/prolyl-tRNA synthetase domain protein {ECO:0000313|EMBL:EEX09793.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Si
prolyl-tRNA synthetase
BD02T64_scaffold_328_12
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8765..9517)
DNA (753bp) protein (251aa)
Asp/Glu racemase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F09BD3 rbh
Asp/Glu racemase {ECO:0000313|EMBL:KID07854.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
Asp/Glu/Hydantoin racemase family protein rbh
BD02T64_scaffold_328_13
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9626..10207)
DNA (582bp) protein (194aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
UPI0003D6CF2E related cluster n=1 Tax=unknown RepID=UPI0003D6CF2E rbh
FMN-dependent NADH-azoreductase
BD02T64_scaffold_328_14
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10336..11214
DNA (879bp) protein (293aa)
LysR family transcriptional regulator n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002EC039D rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KID07852.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leis
LysR family transcriptional regulator rbh
BD02T64_scaffold_328_15
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11211..12113
DNA (903bp) protein (301aa)
Integral membrane protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CVC4_9RHOB rbh
Integral membrane protein {ECO:0000313|EMBL:EEX09797.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacusc
integral membrane protein
BD02T64_scaffold_328_16
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12195..12530)
DNA (336bp) protein (112aa)
Transcriptional regulator, arsR family n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7ETF0_PHAG2 rbh
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:KII11742.1}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Pha
BD02T64_scaffold_328_17
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12616..13530
DNA (915bp) protein (305aa)
ABC transporter permease n=1 Tax=Phaeobacter gallaeciensis RepID=UPI000310FDCB rbh
ABC transporter permease {ECO:0000313|EMBL:KIC35048.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. AN
ABC transporter permease rbh
BD02T64_scaffold_328_18
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13715..14077
DNA (363bp) protein (121aa)
ATP synthase F0, subunit I {ECO:0000313|EMBL:EDZ45779.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EDZ45779.1};; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rh
ATP synthase F0, subunit I n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDY6_9RHOB rbh
ATP synthase F0 subunit I
BD02T64_scaffold_328_19
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14077..14880
DNA (804bp) protein (268aa)
ATP synthase subunit a n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDY5_9RHOB rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
F0F1 ATP synthase subunit A rbh
BD02T64_scaffold_328_20
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14962..15198
DNA (237bp) protein (79aa)
ATP synthase C chain (EC:3.6.3.14)
ATP synthase C chain {ECO:0000313|EMBL:AHM04053.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AHM04053.1};; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
ATP synthase subunit C n=2 Tax=Roseobacter RepID=A3X5Z5_9RHOB rbh
BD02T64_scaffold_328_21
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15284..15841
DNA (558bp) protein (186aa)
F0F1 ATP synthase subunit B' (EC:3.6.3.14)
UPI0003D6B8D8 related cluster n=1 Tax=unknown RepID=UPI0003D6B8D8 rbh
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
BD02T64_scaffold_328_22
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15846..16406
DNA (561bp) protein (187aa)
F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Roseobacter sp. MED193 RepID=A3X5Z7_9RHOB rbh
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
BD02T64_scaffold_328_23

Not on your lists

16540..16953
DNA (414bp) protein (138aa)
Putative DUF2241 family protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RGV7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN82846.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative DUF2241 family protein
BD02T64_scaffold_328_24
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16925..17470)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S447_RHIET rbh
Uncharacterized protein {ECO:0000313|EMBL:KEJ96832.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
hypothetical protein
BD02T64_scaffold_328_25
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17518..18300)
DNA (783bp) protein (261aa)
GntR family transcriptional regulator n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00030EAA60 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC12432.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leis
GntR family transcriptional regulator rbh
BD02T64_scaffold_328_26
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18470..19672
DNA (1203bp) protein (401aa)
Aminotransferase, classes I and II n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNH5_RUEPO rbh
aminotransferase, classes I and II rbh
Aminotransferase, classes I and II {ECO:0000313|EMBL:AAV96465.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria p
BD02T64_scaffold_328_27
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19737..20135
DNA (399bp) protein (133aa)
Lipoprotein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNH6_RUEPO rbh
lipoprotein, putative
Lipoprotein, putative {ECO:0000313|EMBL:AAV96464.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (stra
BD02T64_scaffold_328_28
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20307..23720
DNA (3414bp) protein (1138aa)
Chromosome partition protein Smc n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ES63_9RHOB rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseo
sMC; chromosome segregation protein SMC rbh
BD02T64_scaffold_328_29
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23793..24260
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ES62_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA17232.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
Putative bacterial sensory transduction regulator
BD02T64_scaffold_328_30
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24299..25468)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X5Y6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ46767.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
lytic murein transglycosylase rbh
Displaying items 1-30 of 103 in total

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