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BD02T64_scaffold_407

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_407_1
unknown

Not on your lists

3..284
DNA (282bp) protein (94aa)

This feature has no annotations

BD02T64_scaffold_407_2
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

444..818
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQZ4_DINSH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV92537.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacte
BD02T64_scaffold_407_3
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(994..1545)
DNA (552bp) protein (184aa)
Single-stranded DNA-binding protein n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7EYX3_PHAIB rbh
ssb; ssDNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=391619 species="Bacteria; Proteobacteria; Alph
BD02T64_scaffold_407_4
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1790..2374
DNA (585bp) protein (195aa)
Transglycosylase SLT domain protein n=1 Tax=Ruegeria sp. R11 RepID=B7QTC9_9RHOB rbh
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EEB71077.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria
Soluble lytic murein transglycosylase rbh
BD02T64_scaffold_407_5
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2506..2880
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDE4_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC14294.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_407_6
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3011..4147
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XAJ8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ45157.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
di-heme cytochrome c peroxidase rbh
BD02T64_scaffold_407_7
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4332..5768
DNA (1437bp) protein (479aa)
Tetratricopeptide repeat domain protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDE5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIC14295.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_407_8
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5792..7879)
DNA (2088bp) protein (696aa)
ABC transporter ATP-binding protein n=1 Tax=Ruegeria conchae RepID=UPI0002378761 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC44236.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria
oligopeptide/dipeptide ABC transporter, ATP-binding protein rbh
BD02T64_scaffold_407_9
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7974..9191)
DNA (1218bp) protein (406aa)
peptide ABC transporter permease n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002E6B461 rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KIC08865.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisinger
peptide ABC transporter permease rbh
BD02T64_scaffold_407_10
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9205..10296)
DNA (1092bp) protein (364aa)
Oligopeptide/dipeptide ABC transporter, permease protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ER07_9RHOB rbh
Oligopeptide/dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:EBA17713.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobac
peptide ABC transporter permease
BD02T64_scaffold_407_11
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10454..12118)
DNA (1665bp) protein (555aa)
Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDE9_9RHOB rbh
Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:EDZ47214.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" sou
diguanylate cyclase rbh
BD02T64_scaffold_407_12
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12400..13206)
DNA (807bp) protein (269aa)
Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XAK1_9RHOB rbh
Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:EAQ45152.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" sou
transcriptional regulator, AraC family
BD02T64_scaffold_407_13
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13297..14157)
DNA (861bp) protein (287aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Roseobacter sp. MED193 RepID=A3XAK0_9RHOB rbh
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase rbh
BD02T64_scaffold_407_14
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14290..15036
DNA (747bp) protein (249aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ER13_9RHOB rbh
BD02T64_scaffold_407_15
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15257..15820
DNA (564bp) protein (188aa)
UPI0003D6A5A9 related cluster n=1 Tax=unknown RepID=UPI0003D6A5A9 rbh
ribosome-recycling factor rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=999552 species="Bacteria;
BD02T64_scaffold_407_16
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15830..16588
DNA (759bp) protein (253aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobact
uppS; undecaprenyl pyrophosphate synthetase UppS (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Ruegeria sp. R11 RepID=B7QTB8_9RHOB rbh
BD02T64_scaffold_407_17
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16585..17376
DNA (792bp) protein (264aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;
Phosphatidate cytidylyltransferase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDF5_9RHOB rbh
phosphatidate cytidylyltransferase rbh
BD02T64_scaffold_407_18
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17376..18548
DNA (1173bp) protein (391aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; Short=DXP reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000255|HAMAP-Rule:MF_00183};; 1-deo
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=DXR_RUEPO rbh
BD02T64_scaffold_407_19
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18553..19902
DNA (1350bp) protein (450aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
UPI0003D6D3D6 related cluster n=1 Tax=unknown RepID=UPI0003D6D3D6 rbh
zinc metalloprotease rbh
BD02T64_scaffold_407_20
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20047..20172
DNA (126bp) protein (42aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDF8_9RHOB rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ48077.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
BD02T64_scaffold_407_21
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20355..22691
DNA (2337bp) protein (779aa)
UPI0003D6AF9C related cluster n=1 Tax=unknown RepID=UPI0003D6AF9C rbh
Beta-barrel assembly machine subunit BamA rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
BD02T64_scaffold_407_22
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22696..23316
DNA (621bp) protein (207aa)
outer membrane chaperone Skp n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F1D761 rbh
Outer membrane chaperone Skp {ECO:0000313|EMBL:KIC11425.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp
outer membrane chaperone Skp
BD02T64_scaffold_407_23
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23391..23855
DNA (465bp) protein (155aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC:4.2.1.59 4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ER22_9RHOB rbh
BD02T64_scaffold_407_24
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23861..24646
DNA (786bp) protein (262aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=1265309 species="Bacteria; Proteobacteria;
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CXL5_9RHOB rbh
UDP-N-acetylglucosamine acyltransferase rbh
BD02T64_scaffold_407_25
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24651..25439
DNA (789bp) protein (263aa)
phosphatidate cytidylyltransferase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002EB3A3B rbh
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:KID10341.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leising
phosphatidate cytidylyltransferase rbh
BD02T64_scaffold_407_26
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25436..26623
DNA (1188bp) protein (396aa)
lipid-A-disaccharide synthase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F8267C rbh
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:KID10342.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera s
lipid-A-disaccharide synthase rbh
BD02T64_scaffold_407_27
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26687..27832)
DNA (1146bp) protein (382aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterale
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDG5_9RHOB rbh
thiouridylase rbh
BD02T64_scaffold_407_28
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27965..28243
DNA (279bp) protein (93aa)
UPI0003D6A512 related cluster n=1 Tax=unknown RepID=UPI0003D6A512 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC14479.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
hypothetical protein
BD02T64_scaffold_407_29
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28346..29065
DNA (720bp) protein (240aa)
UPI0003D6D32B related cluster n=1 Tax=unknown RepID=UPI0003D6D32B rbh
chemotaxis protein CheY rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:AHD00995.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methyloh
BD02T64_scaffold_407_30
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29194..31458
DNA (2265bp) protein (755aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase, NAD-dependent (EC:6.5.1.2) rbh
DNA ligase n=1 Tax=Ruegeria sp. R11 RepID=B7QTA4_9RHOB rbh
Displaying items 1-30 of 60 in total

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